Query= MSMg01no456_o15.b1 MSMg01no456_o15.b1 CHROMAT_FILE:
MSMg01no456_o15.b1 PHD_FILE: MSMg01no456_o15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:28:54 2005
(313 letters)
>mm_chr15_37551362_37552075
Length = 714
Score = 507 bits (262), Expect = e-148
Identities = 298/310 (96%), Gaps = 3/310 (0%)
Strand = Plus / Minus
Query: 2 gccttttgagatgctgttggggcagcagaggttcaactcttaccaaacaagaatcagttt 61
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 510 gccttttgagatgctgttggggcaacagaggttcaactcttaccaaacaagaatcagttt 451
Query: 62 attgttggactggatgggcacttggaccatgaagtaggaaaaacaatgaatttctgtcct 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 450 attgttggactggatgggcacttggaccatgaagtaggaaaaacaatgaatttctttcct 391
Query: 122 ggaaaatccttga-aaagtgtatagatgagaacaacacaggtcagagaattacctggttt 180
||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 ggaaaatccttgacaaaatgtatagatgagaacaacacaggtcagagaattacctggttt 331
Query: 181 gcctgaagtcaccctggtgcctggacacagcagcactagagctgaggactcctggtgttt 240
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
Sbjct: 330 gcctgaagtcaccctggtgcctggacacagcagtactagagctgaggactcctggtggct 271
Query: 241 tttattaaca-cagatattgttgatttactgcattgtgttctaaatattttacctcatcc 299
||||||| || ||||||||||||||||||||||||| |||||||||||||||| ||| ||
Sbjct: 270 tttatta-caacagatattgttgatttactgcattgggttctaaatattttacttcaacc 212
Query: 300 tcacaaaatt 309
||||||||||
Sbjct: 211 tcacaaaatt 202
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 313
Length of database: 714
Length adjustment: 9
Effective length of query: 304
Effective length of database: 705
Effective search space: 214320
Effective search space used: 214320
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no456_o15.g1 MSMg01no456_o15.g1 CHROMAT_FILE:
MSMg01no456_o15.g1 PHD_FILE: MSMg01no456_o15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:28:54 2005
(241 letters)
>mm_chr15_37361950_37362590
Length = 641
Score = 389 bits (201), Expect = e-113
Identities = 230/245 (93%), Gaps = 10/245 (4%)
Strand = Plus / Plus
Query: 1 ctgagagctgattccacacctgatttctgatgcagaggttctcaacgcgacaccagattc 60
||||||||||||||||||||||||||||||||||||||||| ||| | ||||||||||||
Sbjct: 201 ctgagagctgattccacacctgatttctgatgcagaggttcccaaggtgacaccagattc 260
Query: 61 ccaggggtggcttcaaatcaagaatgcggccaatcgcagaaccagtctgtggctatgagg 120
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 261 ccaggggtggcttcaaatcaagaaggcggccaatcgcagaaccagtctgtggctatgagg 320
Query: 121 agatgtcccaaggactgttgagtgacaccacacagaccgggccctgaaacaga-----tt 175
||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 321 agatgtcccaaggactgttgagtgacaccacacagaccgggccctgaaacagaacagct- 379
Query: 176 ttttcatcctagctctccatgcagaataccccggctattgacaatctgtcacgccaagaa 235
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 380 ----catcctagctctccatgcagaacaccccggctattgacaatctgtcacgccaagaa 435
Query: 236 cacat 240
|||||
Sbjct: 436 cacat 440
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 241
Length of database: 641
Length adjustment: 9
Effective length of query: 232
Effective length of database: 632
Effective search space: 146624
Effective search space used: 146624
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
