Query= MSMg01no457_e22.b1 MSMg01no457_e22.b1 CHROMAT_FILE:
MSMg01no457_e22.b1 PHD_FILE: MSMg01no457_e22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:29:28 2005
(455 letters)
>mm_chr15_68134076_68134930
Length = 855
Score = 787 bits (407), Expect = 0.0
Identities = 442/455 (97%), Gaps = 4/455 (0%)
Strand = Plus / Plus
Query: 5 gaattcatgttaatacaatgatcctaatagtcaggagagatgtgtgtatacagatattgt 64
||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcatgttaagaaaatgatcctaatagtcaggagagatgtgtgtatacagatattgt 264
Query: 65 ctatattatgataatcatagtatctatatattattataattagcatgttatttaatataa 124
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 265 ctatattatgataatcatagtatctatatattattatatttagcatgttatttaatataa 324
Query: 125 atgtatttttaccatacctggaagtaattcatagaggactagtcaaattattgttaaata 184
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 atgtatttttaccatgcctggaagtaattcatagaggactagtcaaattattgttaaata 384
Query: 185 aggtttgttagatggaccagtacacattttatcatttataaagcaagtagacagtaagga 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aggtttgttagatggaccagtacacattttatcatttataaagcaagtagacagtaagga 444
Query: 245 aagggctgaagtgatggctcaatagctaatagtgtgtacctggctggcagaagatccaaa 304
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 445 aagggctgaagtgatggctcaatagctaagagtgtgtacctggctggcagaagatccaag 504
Query: 305 gtcagttcccagtgcccatgttgagcagtatcatgtatctccagctctatgggctttgtt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gtcagttcccagtgcccatgttgagcagtatcatgtatctccagctctatgggctttgtt 564
Query: 365 ccccttttctgatctccatcggttcccgtacttaggtgtgtatacccccaacacatagat 424
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct: 565 ccccttttctgatctccatgggttcccgtacttaggtgtgtatacccccaacacataggt 624
Query: 425 ac---taat-aaaaatataagaaagaataatctaa 455
|| |||| |||||||||||||||||||| ||||
Sbjct: 625 acaaataattaaaaatataagaaagaataacctaa 659
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 455
Length of database: 855
Length adjustment: 10
Effective length of query: 445
Effective length of database: 845
Effective search space: 376025
Effective search space used: 376025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no457_e22.g1 MSMg01no457_e22.g1 CHROMAT_FILE:
MSMg01no457_e22.g1 PHD_FILE: MSMg01no457_e22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:29:28 2005
(371 letters)
>mm_chr15_68301409_68302179
Length = 771
Score = 559 bits (289), Expect = e-163
Identities = 304/309 (98%), Gaps = 1/309 (0%)
Strand = Plus / Minus
Query: 64 gagatggggtctctcattgaacatggagtttacaga-ttggctatgctggcttgccaatg 122
||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 771 gagatggagtctctcattgaacatggagtttacagatttggctatgctggcttgccaatg 712
Query: 123 agctccaaggatctgccccctaacctcagcacctggattaggtgcatacaggcatacctg 182
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 711 aactccaaggatctgccccctaacctcagcacctggattaggtgcatacaggcatacctg 652
Query: 183 gcttttatataggtgctgaggatccaaactcaggtcttgcatagtagggactttactgcc 242
||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 651 gcttttatataggtgttgaggatcccaactcaggtcttgcatagtagggactttactgcc 592
Query: 243 cgagccagctccatatctcctgcagactgttcttagtcatgaccttctgcacataaacta 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 cgagccagctccatatctcctgcagactgttcttagtcatgaccttctgcacataaacta 532
Query: 303 agccacaaggggaatgaggaatcgcagtataagactcataccagtattcataccacattg 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 agccacaaggggaatgaggaatcgcagtataagactcataccagtattcataccacattg 472
Query: 363 atagcagtt 371
|||||||||
Sbjct: 471 atagcagtt 463
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 371
Length of database: 771
Length adjustment: 9
Effective length of query: 362
Effective length of database: 762
Effective search space: 275844
Effective search space used: 275844
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
