Query= MSMg01no458_b01.b1 MSMg01no458_b01.b1 CHROMAT_FILE:
MSMg01no458_b01.b1 PHD_FILE: MSMg01no458_b01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:30:32 2005
(652 letters)
>mm_chr15_74305067_74306117
Length = 1051
Score = 1178 bits (609), Expect = 0.0
Identities = 639/649 (98%), Gaps = 1/649 (0%)
Strand = Plus / Minus
Query: 4 ggaattcccctaggcttgccttctctgaacagccccctcgcccttaagtttgagtgtttg 63
||||||||||||||| || |||||||||||||||||| ||||| |||||||||||||||
Sbjct: 851 ggaattcccctaggcatggtttctctgaacagcccccttgccctgaagtttgagtgtttg 792
Query: 64 gtccttttggtccatgagcatggaggtttttgagttcagggtttggtttccagcttgtgc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 791 gtccttttggtccatgagcatggaggtttttgagttcagggtttggtttccagcttgtgc 732
Query: 124 cattgttctggatttaatagcagacagcctcgcctgttggttattctctctgcacatttg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 cattgttctggatttaatagcagacagcctcgcctgttggttattctctctgcacatttg 672
Query: 184 gttctcaggaggttcccttgtggcccattgtggtgtctgtttccttgaggtcctgccagg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 gttctcaggaggttcccttgtggcccattgtggtgtctgtttccttgaggtcctgccagg 612
Query: 244 gcttgaaaggaaggtggcattccattctgtctcgcacaggcaggatgtgcatagccactc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 gcttgaaaggaaggtggcattccattctgtctcgcacaggcaggatgtgcatagccactc 552
Query: 304 agttctctcctttacctgtaagctgtgtgtgcctgtctgcctctgctcctgaagaagacg 363
||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 551 agttctctcctttccctgtaagctgtgtgtgcccgtctgcctctgctcctgaagaagacg 492
Query: 364 cctcatctgtcttgctttctgctctccgagaaagagacctgcagtgctattggggacgcc 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 cctcatctgtcttgctttctgctctccgagaaagagacctgcagtgctattggggacgcc 432
Query: 424 attgtttaaggccccacagaacctcacagtgccctctgtctgtcttcacgtctggctgaa 483
||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||
Sbjct: 431 attgtttaaggccccacagaacctcacagtgtcctccgtctgtcttcacgtctggctgaa 372
Query: 484 aggccgggactgtaattcccctgggtgaagtgtggtgggaatactctgactggcccctgc 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 aggccgggactgtaattcccctgggtgaagtgtggtgggaatactctgactggcccctgc 312
Query: 544 cagccatcccccagtctcaggactagaaaggtctggctcctttcccagagcttaaaggag 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 cagccatcccccagtctcaggactagaaaggtctggctcctttcccagagcttaaaggag 252
Query: 604 tgcagcccagtgactgaagtgatttggtgtttcaggctgcctgagtttg 652
||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 251 tgcagcccagtgactgaagtgatttggtgtttcaggctgcc-gagtttg 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 652
Length of database: 1051
Length adjustment: 10
Effective length of query: 642
Effective length of database: 1041
Effective search space: 668322
Effective search space used: 668322
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no458_b01.g1 MSMg01no458_b01.g1 CHROMAT_FILE:
MSMg01no458_b01.g1 PHD_FILE: MSMg01no458_b01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:30:32 2005
(587 letters)
>mm_chr15_74297599_74298584
Length = 986
Score = 379 bits (196), Expect = e-109
Identities = 236/250 (94%), Gaps = 3/250 (1%)
Strand = Plus / Plus
Query: 339 atccctaacatccacaagaggatagacacataccagagggagtgcactggtcccacaacc 398
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 atccctaatatccacaagaggatagacacataccagagggagtgcactggtcccacaacc 598
Query: 399 acacacaggtctcatgaaaacacagaagcaacagggcagagcagaagatgcctgga-cac 457
||||||||||||||||| | ||||||||||||| ||||||||||| | ||||| | ||
Sbjct: 599 acacacaggtctcatgagagcacagaagcaacacggcagagcagagggtgcct--accat 656
Query: 458 gctggacagatgaagaaatggatggactccgtgacacaaacttggccaaaaggccaagac 517
|||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||
Sbjct: 657 gctggacagatgaagaaatgaatggactccgtgacacgaacttggccaaaaggccaagac 716
Query: 518 aggtcaactccacatgaggacaggctggtggggcacagagatgttctagggatcagctcg 577
||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 717 aggtcaactccacgtgaggacaggatggtggggcacagagatgttctagggatcagctcg 776
Query: 578 tgtttacagg 587
||||||||||
Sbjct: 777 tgtttacagg 786
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 587
Length of database: 986
Length adjustment: 10
Effective length of query: 577
Effective length of database: 976
Effective search space: 563152
Effective search space used: 563152
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
