Query= MSMg01no458_f01.b1 MSMg01no458_f01.b1 CHROMAT_FILE:
MSMg01no458_f01.b1 PHD_FILE: MSMg01no458_f01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:30:52 2005
(262 letters)
>mm_chr15_43807150_43807815
Length = 666
Score = 468 bits (242), Expect = e-136
Identities = 251/256 (98%), Gaps = 4/256 (1%)
Strand = Plus / Minus
Query: 1 aacatctttaccatcttgttcgaataatgtaatttagatgttccatgttttatgacatct 60
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 419 aacatctttaccatcttgttcaaataatgtaatttagatgttccatgttttatgacatct 360
Query: 61 tttgttctgttgctataaaatcttgaagaaagtgttagaacattagaccacaatattcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 tttgttctgttgctataaaatcttgaagaaagtgttagaacattagaccacaatattcaa 300
Query: 121 gtcattttgagtatgtgctcccaagccaatgtcttcttttatttgggggg----gggggg 176
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 299 gtcattttgagtatgtgctcccaagccaatgtcttcttttatttgggggggggagggggg 240
Query: 177 cagagcaaactttctttcttttgagatgaaatctatatttgtatgtatgtatgtatgtat 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 cagagcaaactttctttcttttgagatgaaatctatatttgtatgtatgtatgtatgtat 180
Query: 237 gtatgtatgtatgtat 252
||||||||||||||||
Sbjct: 179 gtatgtatgtatgtat 164
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 8
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's gapped: 6
Number of HSP's successfully gapped: 1
Length of query: 262
Length of database: 666
Length adjustment: 9
Effective length of query: 253
Effective length of database: 657
Effective search space: 166221
Effective search space used: 166221
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no458_f01.g1 MSMg01no458_f01.g1 CHROMAT_FILE:
MSMg01no458_f01.g1 PHD_FILE: MSMg01no458_f01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:30:52 2005
(325 letters)
>mm_chr15_43630117_43630839
Length = 723
Score = 605 bits (313), Expect = e-177
Identities = 323/329 (98%), Gaps = 6/329 (1%)
Strand = Plus / Plus
Query: 1 tagtggtaaaacacgatagatgttttttcccctttcaagaataaatccatctgaagatgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tagtggtaaaacacgatagatgttttttcccctttcaagaataaatccatctgaagatgg 260
Query: 61 tctctctattccttgataattctcatccttttctgctatatatgactttggaataaaaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tctctctattccttgataattctcatccttttctgctatatatgactttggaataaaaag 320
Query: 121 cttagtaagtcatataataaagcaatctcatccacatttaatttatgactaagaatgaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cttagtaagtcatataataaagcaatctcatccacatttaatttatgactaagaatgaag 380
Query: 181 aaccagaaaagacatgaacattttttaaggtttcccttaaaaaa----acaaacaaacaa 236
|||||||||||||||||||||||| |||||||||||||||||| ||||||||||||
Sbjct: 381 aaccagaaaagacatgaacatttt--aaggtttcccttaaaaaaccaaacaaacaaacaa 438
Query: 237 acaaaaaaacttgccacagattacataggggacttctatttatgtccatcagccagaaat 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 acaaaaaaacttgccacagattacataggggacttctatttatgtccatcagccagaaat 498
Query: 297 tagtcatgaatcatacgtaagtgttaaga 325
|||||||||||||||||||||||||||||
Sbjct: 499 tagtcatgaatcatacgtaagtgttaaga 527
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 325
Length of database: 723
Length adjustment: 9
Effective length of query: 316
Effective length of database: 714
Effective search space: 225624
Effective search space used: 225624
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
