Query= MSMg01no458_f10.b1 MSMg01no458_f10.b1 CHROMAT_FILE:
MSMg01no458_f10.b1 PHD_FILE: MSMg01no458_f10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:30:54 2005
(457 letters)
>mm_chr15_31517895_31518751
Length = 857
Score = 451 bits (233), Expect = e-131
Identities = 262/277 (94%), Gaps = 10/277 (3%)
Strand = Plus / Plus
Query: 186 gttgttgcttttttgagacatggtttctctgtgtaccccctggctgtcctggaactcact 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 gttgttgcttttttgagacatggtttctctgtgtaccccctggctgtcctggaactcact 445
Query: 246 ctgtattttatac-----tggccttgaaatcagaaatccacctgcctctgccttccaagt 300
||||| || |||||||||||||||||||| ||||||||||||||||||||
Sbjct: 446 ctgtag-----accaggctggccttgaaatcagaaatctgcctgcctctgccttccaagt 500
Query: 301 gctgggattacaggggtgcgccaccactgcctggccgagaaagtttttaagaactagttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gctgggattacaggggtgcgccaccactgcctggccgagaaagtttttaagaactagttt 560
Query: 361 attggttttccaatgatgaacatttactgatggaacttaagccttgaatggatctgttca 420
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 561 attggttttccaatgatgaacatttactgatggaacttaagccccgaatggatctgttca 620
Query: 421 gaatggcagctgaaggatgtatgtgttcctggtacag 457
|||||||||||||||||||||||||||||||||||||
Sbjct: 621 gaatggcagctgaaggatgtatgtgttcctggtacag 657
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 457
Length of database: 857
Length adjustment: 10
Effective length of query: 447
Effective length of database: 847
Effective search space: 378609
Effective search space used: 378609
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no458_f10.g1 MSMg01no458_f10.g1 CHROMAT_FILE:
MSMg01no458_f10.g1 PHD_FILE: MSMg01no458_f10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:30:54 2005
(319 letters)
>mm_chr15_31661652_31662371
Length = 720
Score = 603 bits (312), Expect = e-177
Identities = 318/320 (99%), Gaps = 1/320 (0%)
Strand = Plus / Minus
Query: 1 tcagttaggacctaccatcgagcactctccatctcaccttcaggagatttttctgtactt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 tcagttaggacctaccatcgagcactctccatctcaccttcaggagatttttctgtactt 461
Query: 61 ctcactctgataaacaagatcacagttatgcactgcactcttgatgcatcagcagtaatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 ctcactctgataaacaagatcacagttatgcactgcactcttgatgcatcagcagtaatg 401
Query: 121 caaggtctagtgaaagatgggagtcttgtctactggcatgatggttgacccaagaaacaa 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 400 caaggtctagtgaaagatgggagtcttgtctactggcatgatggttgacccaagaaccaa 341
Query: 181 agctttagttttgaatgggaagcctggtcacctgcagttttagtctctccagggtgagaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 agctttagttttgaatgggaagcctggtcacctgcagttttagtctctccagggtgagaa 281
Query: 241 gcagttatataatctagatatcacacagcaagggtacatcagtg-tcagagtctagtcca 299
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 280 gcagttatataatctagatatcacacagcaagggtacatcagtgatcagagtctagtcca 221
Query: 300 aactgaactaacaaaggctg 319
||||||||||||||||||||
Sbjct: 220 aactgaactaacaaaggctg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 720
Length adjustment: 9
Effective length of query: 310
Effective length of database: 711
Effective search space: 220410
Effective search space used: 220410
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
