Query= MSMg01no459_a16.b1 MSMg01no459_a16.b1 CHROMAT_FILE:
MSMg01no459_a16.b1 PHD_FILE: MSMg01no459_a16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:31:48 2005
(440 letters)
>mm_chr15_88371164_88372003
Length = 840
Score = 837 bits (433), Expect = 0.0
Identities = 439/441 (99%), Gaps = 2/441 (0%)
Strand = Plus / Plus
Query: 1 attgaatgtggaccattgggagacagcccacaacccaatgcctagacctgcctgcaaaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attgaatgtggaccattgggagacagcccacaacccaatgcctagacctgcctgcaaaac 260
Query: 61 caagtaccctgacagaagaagaaaagtcaagagttacaaggcagctgtagaagaatggcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caagtaccctgacagaagaagaaaagtcaagagttacaaggcagctgtagaagaatggcc 320
Query: 121 tgtttgagagctgcattgtgctcagtgacatatgagctgcttccaggggtccctcactga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgtttgagagctgcattgtgctcagtgacatatgagctgcttccaggggtccctcactga 380
Query: 181 agcagaaaaaccttagacagggctgccaactacagacaagagaagctgccccgtgtatta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agcagaaaaaccttagacagggctgccaactacagacaagagaagctgccccgtgtatta 440
Query: 241 gtgg-gagacaccaggaggttatagaagatctacccaagaggaaacagccagccaacctt 299
|||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtggtg-gacaccaggaggttatagaagatctacccaagaggaaacagccagccaacctt 499
Query: 300 gcccctccacaaatacacaccccagtcaaagaaatgatgggctttctgctttatttctca 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gcccctccacaaatacacaccccagtcaaagaaatgatgggctttctgctttatttctca 559
Query: 360 ggcatcaagctgctggaatgggggggggtgcaaaaaattcaggactagaagagctagggg 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ggcatcaagctgctggaatgggggggggtgcaaaaaattcaggactagaagagctagggg 619
Query: 420 acctccaaaaaacaaatagac 440
|||||||||||||||||||||
Sbjct: 620 acctccaaaaaacaaatagac 640
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 440
Length of database: 840
Length adjustment: 9
Effective length of query: 431
Effective length of database: 831
Effective search space: 358161
Effective search space used: 358161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no459_a16.g1 MSMg01no459_a16.g1 CHROMAT_FILE:
MSMg01no459_a16.g1 PHD_FILE: MSMg01no459_a16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:31:48 2005
(165 letters)
>mm_chr15_88544830_88545394
Length = 565
Score = 315 bits (163), Expect = 7e-91
Identities = 163/163 (100%)
Strand = Plus / Minus
Query: 1 tgagaggatgaggcatgttgaatttcttggcaagtgactggaaaacctggtgctttgtag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 tgagaggatgaggcatgttgaatttcttggcaagtgactggaaaacctggtgctttgtag 304
Query: 61 atagggctctggtcttgtttggtgttccttggttgctatcaagggatgtgtgctatccct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 atagggctctggtcttgtttggtgttccttggttgctatcaagggatgtgtgctatccct 244
Query: 121 gtggcagtaggtcttgtccccgtacatttgtgaagtagtaaga 163
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 gtggcagtaggtcttgtccccgtacatttgtgaagtagtaaga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 165
Length of database: 565
Length adjustment: 8
Effective length of query: 157
Effective length of database: 557
Effective search space: 87449
Effective search space used: 87449
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
