Query= MSMg01no460_b13.b1 MSMg01no460_b13.b1 CHROMAT_FILE:
MSMg01no460_b13.b1 PHD_FILE: MSMg01no460_b13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:33:15 2005
(547 letters)
>mm_chr15_63403154_63404101
Length = 948
Score = 1038 bits (537), Expect = 0.0
Identities = 543/545 (99%), Gaps = 1/545 (0%)
Strand = Plus / Minus
Query: 4 ggaattcatttgtagcctct-aaaatcttttagaaagacaccattaatggtaacttgtat 62
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 748 ggaattcatttgtagcctctaaaaatcttttagaaagacaccattaatggtaacttgtat 689
Query: 63 agtcgatactctcacgtgttcatattattagaatcaagttctctggacagatctctttgt 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 agtcgatactctcacgtgttcatattattagaatcaagttctctggacagatctctttgt 629
Query: 123 taagcagcagagttttatcattaatttaagacttagcagatagttatcttcatgagatat 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 taagcagcagagttttatcattaatttaagacttagcagatagttatcttcatgagatat 569
Query: 183 tttccagactttcaaacacaactggtagatttgagaataaacatcttcaactgcttcccc 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 tttccagactttcaaacacaactggtagatttgagaataaacatcttcaactgcttcccc 509
Query: 243 tcttccaatgttccaacagctggccttaaaactgatgttctcttgaagattgcatcaaag 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 tcttccaatgttccaacagctggccttaaaactgatgttctcttgaagattgcatcaaag 449
Query: 303 agatgcatcaatatcttcatcactggccaattactccagccagtgtgagtccttttagat 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 agatgcatcaatatcttcatcactggccaattactccagccagtgtgagtccttttagat 389
Query: 363 gtctatgccattttattccctagattataacagtctgaagacttcattcttaatgtcttc 422
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 388 gtctatgccattttattccctagattataacagtttgaagacttcattcttaatgtcttc 329
Query: 423 ttgatttagatctaaaatccattatatcaacttctcttctcaatttccaagccttttctt 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 ttgatttagatctaaaatccattatatcaacttctcttctcaatttccaagccttttctt 269
Query: 483 ttgtttaaatcctcatcttttactcagatttttaaaaattcagctgcccactgcctcttt 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 ttgtttaaatcctcatcttttactcagatttttaaaaattcagctgcccactgcctcttt 209
Query: 543 tgacc 547
|||||
Sbjct: 208 tgacc 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 547
Length of database: 948
Length adjustment: 10
Effective length of query: 537
Effective length of database: 938
Effective search space: 503706
Effective search space used: 503706
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no460_b13.g1 MSMg01no460_b13.g1 CHROMAT_FILE:
MSMg01no460_b13.g1 PHD_FILE: MSMg01no460_b13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:33:15 2005
(151 letters)
>mm_chr15_63213618_63214168
Length = 551
Score = 267 bits (138), Expect = 2e-76
Identities = 144/146 (98%)
Strand = Plus / Plus
Query: 1 cacagtgttgacattctgacttttcggacaaaaacatcctttgaaagtctgtcctatccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cacagtgttgacattctgacttttcggacaaaaacatcctttgaaagtctgtcctatccc 260
Query: 61 ttgtgaaacatttagttgtacccaggagtatacttaccatatgcaacccttgttccttgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttgtgaaacatttagttgtacccaggagtatacttaccatatgcaacccttgttccttgt 320
Query: 121 gacagtcaaagttgctgcaaacttat 146
||||| ||||||||||||||| ||||
Sbjct: 321 gacagacaaagttgctgcaaaattat 346
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 151
Length of database: 551
Length adjustment: 8
Effective length of query: 143
Effective length of database: 543
Effective search space: 77649
Effective search space used: 77649
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
