Query= MSMg01no461_b06.b1 MSMg01no461_b06.b1 CHROMAT_FILE:
MSMg01no461_b06.b1 PHD_FILE: MSMg01no461_b06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:34:32 2005
(249 letters)
>mm_chr15_66797097_66797746
Length = 650
Score = 443 bits (229), Expect = e-129
Identities = 244/249 (97%), Gaps = 1/249 (0%)
Strand = Plus / Minus
Query: 1 tagaggagagttcaggcacttaaggagaatgcgaggaagtccgccttggcacctcagaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 tagaggagagttcaggcacttaaggagaatgcgaggaagtccgccttggcacctcagaat 390
Query: 61 aagaacatgcttacaaaatcaggcccacaaacaggctctttgaaccaagagtttcttact 120
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 389 aagaacatgcttacaaaatcaggcccacaaacaggctctttgaaacaagagtttcttact 330
Query: 121 gtcctctctatttagtcgatctccatgcccactggctacctctgctttctcatgctctgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 gtcctctctatttagtcgatctccatgcccactggctacctctgctttctcatgctctgt 270
Query: 181 ctctcggactataggtctaactagctcttccctacc-aaggaggtagaaagaaaggcata 239
|||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||| ||
Sbjct: 269 ctctcggactataggtctaactagttcttccctacccaaggaagtagaaagaaaggcgta 210
Query: 240 tgaacctga 248
|||||||||
Sbjct: 209 tgaacctga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 650
Length adjustment: 9
Effective length of query: 240
Effective length of database: 641
Effective search space: 153840
Effective search space used: 153840
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no461_b06.g1 MSMg01no461_b06.g1 CHROMAT_FILE:
MSMg01no461_b06.g1 PHD_FILE: MSMg01no461_b06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:34:32 2005
(223 letters)
>mm_chr15_66636936_66637558
Length = 623
Score = 400 bits (207), Expect = e-116
Identities = 219/223 (98%)
Strand = Plus / Plus
Query: 1 ctcagtcatacagccaaatcataaacactgagggaaccatgtattcatacaagagacatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 201 ctcagtcatacagccaaatcataaacactgagggaaccatgtattcatacaggagacatg 260
Query: 61 aagtccagggggcctgttggatacagcacaaccatgacaagaaacctaggcctggaaacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aagtccagggggcctgttggatacagcacaaccatgacaagaaacctaggcctggaaacc 320
Query: 121 cactgtgtgaaggagaaaggacagaagaccgatcagtgaaggcttaatgctacctcaggt 180
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 321 cactgtgtgaaggagaaaggacagaagaccgatcagtgaaggcttaatgttacctcaggt 380
Query: 181 tgggggtagaggggagatatgaaaataattccagacttgccag 223
||||||| | |||||||||||||||||||||||||||||||||
Sbjct: 381 tgggggtgggggggagatatgaaaataattccagacttgccag 423
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 223
Length of database: 623
Length adjustment: 9
Effective length of query: 214
Effective length of database: 614
Effective search space: 131396
Effective search space used: 131396
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
