Query= MSMg01no461_l14.b1 MSMg01no461_l14.b1 CHROMAT_FILE:
MSMg01no461_l14.b1 PHD_FILE: MSMg01no461_l14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:35:26 2005
(371 letters)
>mm_chr15_78407590_78408360
Length = 771
Score = 547 bits (283), Expect = e-160
Identities = 341/371 (91%), Gaps = 20/371 (5%)
Strand = Plus / Minus
Query: 1 catctgacccatcatatgcatatatcttcataccatgatccaccacctatccatttgtgc 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 770 catctgacccatcatgtgcatatatcttcataccatgatccaccacctatccatttgtgc 711
Query: 61 atgcatgcatccatctctctctctctctctctctctctctctctctctctctctctctct 120
|||||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct: 710 atgcatgcatccatctctctctctctctctctctctctctctctctctct-------t-t 659
Query: 121 ctctctctctctttctctctctctctctccatgtccatccacacaccctcccttctatct 180
||| ||||||||| |||||||||||||||| |||||||||||||||||| |||| ||
Sbjct: 658 ctccctctctctt----tctctctctctccatgcccatccacacaccctcccatctacct 603
Query: 181 gaagtgagctaggggagctagctgcagaggggcccctgagacaaggatgtcagatcctag 240
||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 602 gaagtgagctaggggagctagctgcagaggg--------gacaaggatgtcagatcctag 551
Query: 241 ctctttcttatgactaggtttctggtgaggaaagtccctgatggagggaatggcctgcgt 300
|||| | |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 ctctgccacatgactaggtttctggtgaggaaagtccctgatggagggaatggcctgcgt 491
Query: 301 tcttctggagatttcctgggagaaagtcccctctctgagccctggttgtacctggtacag 360
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 tcttctggggatttcctgggagaaagtcccctctctgagccctggttgtacctggtacag 431
Query: 361 cctcccaggtg 371
|||||||||||
Sbjct: 430 cctcccaggtg 420
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 43
Number of extensions: 21
Number of successful extensions: 21
Number of sequences better than 10.0: 1
Number of HSP's gapped: 11
Number of HSP's successfully gapped: 1
Length of query: 371
Length of database: 771
Length adjustment: 9
Effective length of query: 362
Effective length of database: 762
Effective search space: 275844
Effective search space used: 275844
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no461_l14.g1 MSMg01no461_l14.g1 CHROMAT_FILE:
MSMg01no461_l14.g1 PHD_FILE: MSMg01no461_l14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:35:26 2005
(244 letters)
>mm_chr15_78243659_78244302
Length = 644
Score = 456 bits (236), Expect = e-133
Identities = 242/244 (99%)
Strand = Plus / Plus
Query: 1 ttcctgaccaacgaaggcctggagaagagcccagaggagatcaaacgcctgtttaaggag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttcctgaccaacgaaggcctggagaagagcccagaggagatcaaacgcctgtttaaggag 260
Query: 61 aagaaggtggacctgtccaagcccttggtagccacgtgtggctccggtgtcacagcctgc 120
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aagaaggtggacctgtctaagcccttggtagccacgtgtggctccggtgtcacagcctgc 320
Query: 121 cacgtggtcctgggggccttcctctgtggcaagccagacgtgcctgtctatgatggctcc 180
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 321 cacgtggtcctgggggccttcctctgtggcaagtcagacgtgcctgtctatgatggctcc 380
Query: 181 tgggtagagtggtacatgcgtgcccagccagagcatatcatctctgagggccgagggaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgggtagagtggtacatgcgtgcccagccagagcatatcatctctgagggccgagggaag 440
Query: 241 accc 244
||||
Sbjct: 441 accc 444
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
