Query= MSMg01no461_o03.b1 MSMg01no461_o03.b1 CHROMAT_FILE:
MSMg01no461_o03.b1 PHD_FILE: MSMg01no461_o03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:35:39 2005
(233 letters)
>mm_chr15_83486096_83486728
Length = 633
Score = 404 bits (209), Expect = e-117
Identities = 227/233 (97%)
Strand = Plus / Plus
Query: 1 gaacaaggcatcatgagtaccacagacagtgcctctggctcagcacgctggactctggga 60
||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 201 gaacaaggcatcaagagtaccatagacagtgcctctggctcagcacgctggactctggga 260
Query: 61 agatggataaaggaatgcccctcatctctgaaaaggagcctatactctggagggttaaga 120
|||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 261 agatggataaaggaatgcccctcatctctgaaaaggagcctagactctggaggggtaaga 320
Query: 121 gattggggtacagagccctgcagcctctccacaccagtctagaagtttctgggcccagcc 180
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 321 gattggggtacagagccctgcagcctctccgcaccagtctagaagtttctgggcccagcc 380
Query: 181 tgggttcctgaccaactctagagtcctaggtccttgaaacacaagtgagcctg 233
|||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgggctcctgaccaactctagagtcctaggtccttgaaacacaagtgagcctg 433
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 233
Length of database: 633
Length adjustment: 9
Effective length of query: 224
Effective length of database: 624
Effective search space: 139776
Effective search space used: 139776
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no461_o03.g1 MSMg01no461_o03.g1 CHROMAT_FILE:
MSMg01no461_o03.g1 PHD_FILE: MSMg01no461_o03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:35:39 2005
(334 letters)
>mm_chr15_83696852_83697584
Length = 733
Score = 615 bits (318), Expect = e-180
Identities = 330/334 (98%), Gaps = 1/334 (0%)
Strand = Plus / Minus
Query: 1 ccccagagctgcttcagaaccttaccctacccatcacgagactctcaggatacgcaggct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 ccccagagctgcttcagaaccttaccctacccatcacgagactctcaggatacgcaggct 474
Query: 61 cctgctctaaccctcactgaggcctccctgggcaacccctcactgaggcttccctgggca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 cctgctctaaccctcactgaggcctccctgggcaacccctcactgaggcttccctgggca 414
Query: 121 accacagggcggccgctggcctcgggtgctctcaatcatttgagcaaataaaaatagtct 180
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 413 accacagggcggccgctggcctcgggcgctctcaatcatttgagcaaataaaaatagtct 354
Query: 181 ttgtggggaatgactcttgagactttaaaagaactatgactaataaaatgttttaaaact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 ttgtggggaatgactcttgagactttaaaagaactatgactaataaaatgttttaaaact 294
Query: 241 tggttattcttggggatttgttcacgactgcccgcagggcaccccctgcacattattcga 300
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 tgg-gattcttggggatttgttcacgactgcccgcagggcaccccctgcacattattcga 235
Query: 301 gggccaaggctgcctctgcgcacctactttctgt 334
|||||||||||||||||||||||| |||||||||
Sbjct: 234 gggccaaggctgcctctgcgcacccactttctgt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 334
Length of database: 733
Length adjustment: 9
Effective length of query: 325
Effective length of database: 724
Effective search space: 235300
Effective search space used: 235300
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
