Query= MSMg01no461_p08.b1 MSMg01no461_p08.b1 CHROMAT_FILE:
MSMg01no461_p08.b1 PHD_FILE: MSMg01no461_p08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:35:46 2005
(315 letters)
>mm_chr15_66969268_66969982
Length = 715
Score = 592 bits (306), Expect = e-173
Identities = 312/314 (99%)
Strand = Plus / Plus
Query: 1 gttaaacctggatgtcttgggcagagtgcacccatctcaagaattcaaaaagatccacaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gttaaacctggatgtcttgggcagagtgcacccatctcaagaattcaaaaagatccacaa 260
Query: 61 acactttttgtgaattattgtcaatccaacatttgctcgtacagaaaagcaaggcttggg 120
||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 261 acactttttgtgatttattgtcaatccaacatttgctcgtacagaaaagcaaggctcggg 320
Query: 121 aagttgaggcagggttcaagtgaatgaggtttgtggggataagggtgtctggcaccttaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aagttgaggcagggttcaagtgaatgaggtttgtggggataagggtgtctggcaccttaa 380
Query: 181 attcttgcaaaaaccttaaccaagggtagaatgggacttttctggtttatctatcagcag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 attcttgcaaaaaccttaaccaagggtagaatgggacttttctggtttatctatcagcag 440
Query: 241 ataggttcttatacttactaatgatttattgcatgcttggtactttctttgctagaaaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ataggttcttatacttactaatgatttattgcatgcttggtactttctttgctagaaaac 500
Query: 301 attaactacttagg 314
||||||||||||||
Sbjct: 501 attaactacttagg 514
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 315
Length of database: 715
Length adjustment: 9
Effective length of query: 306
Effective length of database: 706
Effective search space: 216036
Effective search space used: 216036
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no461_p08.g1 MSMg01no461_p08.g1 CHROMAT_FILE:
MSMg01no461_p08.g1 PHD_FILE: MSMg01no461_p08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:35:46 2005
(343 letters)
>mm_chr15_67192368_67193110
Length = 743
Score = 623 bits (322), Expect = 0.0
Identities = 339/347 (97%), Gaps = 4/347 (1%)
Strand = Plus / Minus
Query: 1 ccacagggaaactgcacaaacagtttcatgtcaacacatcatgggccaaatatttctagt 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 742 ccacagggaaactgcacaaacagtttcatgtcaacacatcatgggccaaatatttctact 683
Query: 61 catccctgagcacagaactaattggaattcctgatgctcccccagcttgctctcttcccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 catccctgagcacagaactaattggaattcctgatgctcccccagcttgctctcttcccc 623
Query: 121 tcctcctcccccacttctccttcacctctcccttccccctcctcctctctcctctcttcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 tcctcctcccccacttctccttcacctctcccttccccctcctcctctctcctctcttcc 563
Query: 181 cccctc----ttcctctcctgccacagnaccagtgtgtacatagcaatcggccttcagca 236
|||| | ||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 562 ccccccccatttcctctcctgccacagcaccagtgtgtacatagcaatcggccttcagca 503
Query: 237 ataactttttaaagattcggtttaagcagtaaattgcaaattcctgtttccccccacaca 296
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 ataactttttaaagattcagtttaagcagtaaattgcaaattcctgtttccccccacaca 443
Query: 297 ttccaggctcaggtctgagtgtttctggtaggccaggtcttccatac 343
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 ttccaggctcaggtctgagtgtttctggtaggccaggtcttccatac 396
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 343
Length of database: 743
Length adjustment: 9
Effective length of query: 334
Effective length of database: 734
Effective search space: 245156
Effective search space used: 245156
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
