Query= MSMg01no462_g02.b1 MSMg01no462_g02.b1 CHROMAT_FILE:
MSMg01no462_g02.b1 PHD_FILE: MSMg01no462_g02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:36:22 2005
(563 letters)
>mm_chr15_101965556_101966518
Length = 963
Score = 1042 bits (539), Expect = 0.0
Identities = 554/559 (99%), Gaps = 1/559 (0%)
Strand = Plus / Plus
Query: 5 gaattcttcaacattctcgctctacatagtgtgtgccagggtagacagggctacacagtg 64
||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gaattcttcaacagcct-gctctacatagtgtgtgccagggtagacagggctacacagtg 264
Query: 65 aggccctgtctcaaacaaaagaaaaaacaacttagcagatcttaactccaagttgtaaca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aggccctgtctcaaacaaaagaaaaaacaacttagcagatcttaactccaagttgtaaca 324
Query: 125 gaattcagagggccgcagcccctaaagcagcagcagtaccggagaaaaacatgggactct 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gaattcagagggccgcagcccctaaagcagcagcagtaccggagaaaaacatgggactct 384
Query: 185 ctcggtatttagacaaccagcaaggccagtaaatgaatgaatgaataaaatcttccagag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ctcggtatttagacaaccagcaaggccagtaaatgaatgaatgaataaaatcttccagag 444
Query: 245 atccaaaagtgggaaaaccatgaagaaatattttcttcctgcctcccaaacacctggcac 304
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 atccaaaagcgggaaaaccatgaagaaatattttcttcctgcctcccaaacacctggcac 504
Query: 305 tgtgccctacacacagtaggtgcttagcaatcctgggctaagctgagttcgatcccaatg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tgtgccctacacacagtaggtgcttagcaatcctgggctaagctgagttcgatcccaatg 564
Query: 365 tgcacattggggctcttctgcaggagctacagaccagcacatgtcccacaagagcagaca 424
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 565 tgcacattggggctcttctgcaggagctacagaccagcacatgccccacaagagcagaca 624
Query: 425 cctgcggcgcagcactgggatcccccagggccctgggccaggactcgaacccaggtagat 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 cctgcggcgcagcactgggatcccccagggccctgggccaggactcgaacccaggtagat 684
Query: 485 gccggagccccagatctgaaggcatcggatcttcgagaacctgacagcctcagcaccaag 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 gccggagccccagatctgaaggcatcggatcttcgagaacctgacagcctcagcaccaag 744
Query: 545 cagctgccgccgcactggg 563
|||||||||||||||||||
Sbjct: 745 cagctgccgccgcactggg 763
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 563
Length of database: 963
Length adjustment: 10
Effective length of query: 553
Effective length of database: 953
Effective search space: 527009
Effective search space used: 527009
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no462_g02.g1 MSMg01no462_g02.g1 CHROMAT_FILE:
MSMg01no462_g02.g1 PHD_FILE: MSMg01no462_g02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:36:22 2005
(330 letters)
>mm_chr15_102034505_102035233
Length = 729
Score = 615 bits (318), Expect = e-180
Identities = 327/330 (99%), Gaps = 1/330 (0%)
Strand = Plus / Minus
Query: 1 tcttggtgaagctctaggtctgttccagaaacctgaaaccagaaagggagatgtggccct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 529 tcttggtgaagctctaggtctgttccagaaacctgaaaccagaaagggagatgaggccct 470
Query: 61 taggtgtaacatcttcaggccaaacaacgatcgaagctccctcaacttattttgctgggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 taggtgtaacatcttcaggccaaacaacgatcgaagctccctcaacttattttgctgggc 410
Query: 121 gttctgaagctcaaaaggaggacatgagtcgagagctttctttctaggtcagtagaagaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 gttctgaagctcaaaaggaggacatgagtcgagagctttctttctaggtcagtagaagaa 350
Query: 181 actggcctcctgggccgaaagagcagccaacgggagcaaaagtaagttgggcctcctata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 actggcctcctgggccgaaagagcagccaacgggagcaaaagtaagttgggcctcctata 290
Query: 241 gagaggatctgccaagagagtaagagctgggatttgccatcttaggaacggaagaagggg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 gagaggatctgccaagagagtaagagctgggatttgccatcttaggaacggaagaagggg 230
Query: 301 gcggaggccctttggtgcttttgttgcgga 330
||||||||||||||| |||||||| |||||
Sbjct: 229 gcggaggccctttggggcttttgt-gcgga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 330
Length of database: 729
Length adjustment: 9
Effective length of query: 321
Effective length of database: 720
Effective search space: 231120
Effective search space used: 231120
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
