Query= MSMg01no462_g15.b1 MSMg01no462_g15.b1 CHROMAT_FILE:
MSMg01no462_g15.b1 PHD_FILE: MSMg01no462_g15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:36:25 2005
(526 letters)
>mm_chr15_45670780_45671705
Length = 926
Score = 978 bits (506), Expect = 0.0
Identities = 521/526 (99%)
Strand = Plus / Minus
Query: 1 acttgattgaatgtttttcacatttttttaaatcatgcatcaattttaaaatgttttgtc 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 726 acttgattgaatgtttttcacatttttttaaatcatgcatcaattttaagatgttttgtc 667
Query: 61 aatcctatatctcaactgctgataatagtgctataataagtgaagaaagcaaaggtatat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 aatcctatatctcaactgctgataatagtgctataataagtgaagaaagcaaaggtatat 607
Query: 121 ttgatacatgtagattctactgccatattaagcttagataataaaagtaaataaaattaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 ttgatacatgtagattctactgccatattaagcttagataataaaagtaaataaaattaa 547
Query: 181 ggcattatatagtctcaacatagaaataaatattttaatgttatctatcataaaggaatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 ggcattatatagtctcaacatagaaataaatattttaatgttatctatcataaaggaatg 487
Query: 241 gtaatagtaaatatataatttccctcagattatcattatcggaaatgaattaaaacaaca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 gtaatagtaaatatataatttccctcagattatcattatcggaaatgaattaaaacaaca 427
Query: 301 tattagtttggtcctgagtgcttcatacattcttcatagtagattcaatctggccctgca 360
| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 426 tgttagtttggtcctgagtgcttcatacattcttcatagtagattcaatgtggccctgca 367
Query: 361 cctcagcatgtcctacctttatcactgttcatggaaacattcagagatcatgagcttata 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 cctcagcatgtcctacctttatcactgttcatggaaacattcagagatcatgagcttata 307
Query: 421 aggaacctctcctctggcccagaccttggtctttaccacttacagtctatgattctgtaa 480
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 aggaacctctcctctggctcagaccttggtctttaccacttacagtctatgattctgtaa 247
Query: 481 ccactacatgagatacctttagtctgaccacacacatgctttggac 526
||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 246 ccactacatgagatacctttagtctcaccacacacatgctttggac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 526
Length of database: 926
Length adjustment: 10
Effective length of query: 516
Effective length of database: 916
Effective search space: 472656
Effective search space used: 472656
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no462_g15.g1 MSMg01no462_g15.g1 CHROMAT_FILE:
MSMg01no462_g15.g1 PHD_FILE: MSMg01no462_g15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:36:25 2005
(536 letters)
>mm_chr15_45489972_45490910
Length = 939
Score = 1011 bits (523), Expect = 0.0
Identities = 534/539 (99%), Gaps = 3/539 (0%)
Strand = Plus / Plus
Query: 1 atctggagactcagggtacacatctaactttactgctcaacacataaacttatatgcagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atctggagactcagggtacacatctaactttactgctcaacacataaacttatatgcagt 260
Query: 61 ttttcagccaatcagggtgcaattacataatcaaggt---caggcagggcatcacaaatg 117
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 261 ttttcagccaatcagggtgcaattacataatcaaggtggtcaggcagggcatcacaaatg 320
Query: 118 ttgtccagctgaatctaatcagcttggccagaactctgtagggaaggggccaatcaccca 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttgtccagctgaatctaatcagcttggccagaactctgtagggaaggggccaatcaccca 380
Query: 178 ggaagatatccatgaagatggagaagaagccatcaccctgttgttgggtccttttttttt 237
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 381 ggaagatatccatgaagatggagaagaagccatcgccctgttgttgggtccttttttttt 440
Query: 238 tttcctgtctcattggtgtgttgagagctatcttagatcatgtacagtgtatggtcgatt 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tttcctgtctcattggtgtgttgagagctatcttagatcatgtacagtgtatggtcgatt 500
Query: 298 ggaactccaggagtcatggaaatatatggtgctttgctctccatcccatttttttctccc 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ggaactccaggagtcatggaaatatatggtgctttgctctccatcccatttttttctccc 560
Query: 358 accaggtttatctttacattctccacaggtcccccttttttctttattacaaggctgaat 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 accaggtttatctttacattctccacaggtcccccttttttctttattacaaggctgaat 620
Query: 418 acttctagtaaaagggatttggtgtgtagctgctgaacctttatatgtcaatggcacaga 477
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 621 acttctagtaaaagggatttgatgtgtagctgctgaacctttatatgtcaatggcacaga 680
Query: 478 ttataaaaaacacaattctacctccaacaagaataaaagaataaatgaaaaggtttgca 536
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ttataaaaaacacaattctacctccaacaagaataaaagaataaatgaaaaggtttgca 739
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 536
Length of database: 939
Length adjustment: 10
Effective length of query: 526
Effective length of database: 929
Effective search space: 488654
Effective search space used: 488654
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
