Query= MSMg01no462_n21.b1 MSMg01no462_n21.b1 CHROMAT_FILE:
MSMg01no462_n21.b1 PHD_FILE: MSMg01no462_n21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:37:01 2005
(452 letters)
>mm_chr15_29459143_29459996
Length = 854
Score = 803 bits (415), Expect = 0.0
Identities = 441/451 (97%), Gaps = 4/451 (0%)
Strand = Plus / Minus
Query: 5 ggaattcattacaaatttgaaattttaaaatgaaaattaaagttaacgtgtaaaaaaaga 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 ggaattcattacaaatttgaaattttaaaatgaaaattaaagttaacgtgtaaaaaaaga 595
Query: 65 aagcagtgataataattctgaatggttttaaaaatctcagtgtgtttcctaactctgaag 124
||||||||| |||||||||| ||| |||||||||||||||||||||||||||||||||||
Sbjct: 594 aagcagtgacaataattctggatgtttttaaaaatctcagtgtgtttcctaactctgaag 535
Query: 125 aaagacacagatccttaaaactataatgaaaaatatctgactttactacatgaaatcttc 184
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 534 aaagacacagatccttaaaactataatgaaaaatatctgacttaactacatgaaatcttc 475
Query: 185 aagacaaaagtggttttttttccaaaatcaaaagtaaaaatacagttagaaaatagaaga 244
|||||||||||| |||| |||||||||| |||||||||||||||||||||||||||||||
Sbjct: 474 aagacaaaagtg-ttttatttccaaaataaaaagtaaaaatacagttagaaaatagaaga 416
Query: 245 gcatccagaacttaacattgagagcacacaccccaggcaaatgtttaaaatttccatatg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 gcatccagaacttaacattgagagcacacaccccaggcaaatgtttaaaatttccatatg 356
Query: 305 caaaattcttataaatccagagcaattgtacacttaatctaatttaaat---cataatgc 361
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 355 caaaattcttataaatccagagcaattgtacacttaatctaatttaaataatcataatgc 296
Query: 362 aaggtaataatagatttcactcagtaaacttatgaagaaaagcctatgttttctggcagc 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 aaggtaataatagatttcactcagtaaacttatgaagaaaagcctatgttttctggcagc 236
Query: 422 aagaagccagagcctttacagcactctgggc 452
|||||||||||||||||||||||||||||||
Sbjct: 235 aagaagccagagcctttacagcactctgggc 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 452
Length of database: 854
Length adjustment: 10
Effective length of query: 442
Effective length of database: 844
Effective search space: 373048
Effective search space used: 373048
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no462_n21.g1 MSMg01no462_n21.g1 CHROMAT_FILE:
MSMg01no462_n21.g1 PHD_FILE: MSMg01no462_n21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:37:01 2005
(436 letters)
>mm_chr15_29250785_29251620
Length = 836
Score = 808 bits (418), Expect = 0.0
Identities = 428/436 (98%), Gaps = 8/436 (1%)
Strand = Plus / Plus
Query: 1 ctcatgaaatgtttgcactaaaaatattagtccagatttctctagtctttccagcacaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 ctcatgaaatgtttgcactaaaaatattagtccagatttctctagtctttccagcacaaa 268
Query: 61 gtaacaaaataacaaacccaagtagaagtatctcctcaaaataaataaataaataaataa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 gtaacaaaataacaaacccaagtagaagtatctcctcaaaataaataaataaataaataa 328
Query: 121 ataaataaataaataaataaggttaatttatattatgctgacaaatgactcaaacctaca 180
|||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 ataaataaataa--------ggttaatttatattatgctgacaaatgactcaaacctaca 380
Query: 181 agtgaaagaaaccccaggattagttgccaggaagtagtggcaccttctaataccacagac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agtgaaagaaaccccaggattagttgccaggaagtagtggcaccttctaataccacagac 440
Query: 241 tgaaggattctgtaaatgaccattagactgggtcagtcagaactgcattgtttctgttca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgaaggattctgtaaatgaccattagactgggtcagtcagaactgcattgtttctgttca 500
Query: 301 ggttcatgtccctctgacctatgtcatagaaccatctgcccagcaggtggctctccgtca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ggttcatgtccctctgacctatgtcatagaaccatctgcccagcaggtggctctccgtca 560
Query: 361 cccacaactggactcacttctgtgagcctgactgcccttcattctcaaaacaaaaacaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cccacaactggactcacttctgtgagcctgactgcccttcattctcaaaacaaaaacaaa 620
Query: 421 caaacaaaaagcaaac 436
||||||||||||||||
Sbjct: 621 caaacaaaaagcaaac 636
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 436
Length of database: 836
Length adjustment: 9
Effective length of query: 427
Effective length of database: 827
Effective search space: 353129
Effective search space used: 353129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
