Query= MSMg01no463_e19.b1 MSMg01no463_e19.b1 CHROMAT_FILE:
MSMg01no463_e19.b1 PHD_FILE: MSMg01no463_e19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:37:39 2005
(665 letters)
>mm_chr15_52209029_52210093
Length = 1065
Score = 1216 bits (629), Expect = 0.0
Identities = 654/663 (98%), Gaps = 4/663 (0%)
Strand = Plus / Plus
Query: 5 gaattcatttactgttc-c-tcacaatataatctgctccaaaacgcaaatgagttctgag 62
|||||||||||||| | | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcatttactg--cacatcacaatataatctgctccaaaacgcaaatgagttctgag 262
Query: 63 ctatgaccagttattttcataaatattagttcatttgtttcctccaacaatctgtgaaag 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 ctatgaccagttattttcataaatattagttcatttgtttcctccaacaatctgtgaaag 322
Query: 123 tgatgtttttatcgcttcagaaagaacattagttcaagaacaaactaagaggatgcgtaa 182
||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||
Sbjct: 323 tgatgtttttatcgcttcagaaagaacattagttcaagaacaaactaagagcatgcataa 382
Query: 183 ttaataatctttcacattcctggaggactcactgtgcatccattactttgtgtgcacggt 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 ttaataatctttcacattcctggaggactcactgtgcatccattactttgtgtgcacggt 442
Query: 243 ctctaacactagcaaaggtaaaaggaggtgaatattatttctcagttggagtccatttta 302
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 443 ctctaacactagcaaaggtaaaaggaggtgaatagcatttctcagttggagtccatttta 502
Query: 303 cctgcctgataacacttggtgttatctggaaataatttcagttttcacagccaagtgtga 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 cctgcctgataacacttggtgttatctggaaataatttcagttttcacagccaagtgtga 562
Query: 363 caggtgagaatgagcatggccttacatctaaggaataaaagaatgctaagtcagaactgt 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 caggtgagaatgagcatggccttacatctaaggaataaaagaatgctaagtcagaactgt 622
Query: 423 tgctcccaactaagaattaatttcaggtaaatggtaaaagtactatgagggttcccttaa 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 tgctcccaactaagaattaatttcaggtaaatggtaaaagtactatgagggttcccttaa 682
Query: 483 cattcagctgcagtaaaccccaacacagagatgaaaaaaaaaaacctcagagttagatct 542
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 683 cattcagctgcagtaaaccccaacacagagatggaaaaaaaaaacctcagagttagatct 742
Query: 543 aagccagtagtagccactgatgtttatgtggaatttgaacccagtctctactgaccaggc 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 aagccagtagtagccactgatgtttatgtggaatttgaacccagtctctactgaccaggc 802
Query: 603 aaattttgctgttacagcacagtacacagagttctaacttgctgcaatcttaacaaaaca 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 aaattttgctgttacagcacagtacacagagttctaacttgctgcaatcttaacaaaaca 862
Query: 663 aaa 665
|||
Sbjct: 863 aaa 865
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 665
Length of database: 1065
Length adjustment: 10
Effective length of query: 655
Effective length of database: 1055
Effective search space: 691025
Effective search space used: 691025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no463_e19.g1 MSMg01no463_e19.g1 CHROMAT_FILE:
MSMg01no463_e19.g1 PHD_FILE: MSMg01no463_e19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:37:39 2005
(442 letters)
>mm_chr15_52386389_52387229
Length = 841
Score = 812 bits (420), Expect = 0.0
Identities = 435/440 (98%), Gaps = 1/440 (0%)
Strand = Plus / Minus
Query: 1 cataataaaactatggttatcctcactgcctcagtccatatctagacatgacaacaattt 60
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 cataataaaactgtggttatcctcactgcctcagtccatatctagacatgacaacaattt 580
Query: 61 tacagacaccatttaatataagttattaagacaagaaggtaatactgaggtatggagaaa 120
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 579 tacagacaccatttaatataagttattaagacaagaaggtaataatgaggtatggagaaa 520
Query: 121 ttagtaacaatgatgcagagaatagagaagaaaaaagttgagaattttgaaaaagtaaga 180
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 ttagtaaccatgatgcagagaatagagaagaaaaaagttgagaattttgaaaaagtaaga 460
Query: 181 gcttaaaggaggggccttgtagatgtgaaactcagagctgagggaaaggctgctgtccag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 gcttaaaggaggggccttgtagatgtgaaactcagagctgagggaaaggctgctgtccag 400
Query: 241 ctatactgtagttgctgagtcttggggttcttcaaaggccaggaagaaattcacactgaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 ctatactgtagttgctgagtcttggggttcttcaaaggccaggaagaaattcacactgaa 340
Query: 301 tggaagacagcaatggtcagtgcacagcaatttctcctaactttacattccttagggagt 360
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 339 tggaagacagcaatggtcagtgcacagcaatttctcccaactttacattccttagggagt 280
Query: 361 attgagattcaggattttaatatgcctttcttccttgtttgtttatttgtttgtttttgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 attgagattcaggattttaatatgcctttcttccttgtttgtttatttgtttgtttttgt 220
Query: 421 agggttttgttgttgttgtt 440
||||||||||| ||||||||
Sbjct: 219 agggttttgtt-ttgttgtt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 442
Length of database: 841
Length adjustment: 9
Effective length of query: 433
Effective length of database: 832
Effective search space: 360256
Effective search space used: 360256
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
