Query= MSMg01no463_h18.b1 MSMg01no463_h18.b1 CHROMAT_FILE:
MSMg01no463_h18.b1 PHD_FILE: MSMg01no463_h18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:37:54 2005
(616 letters)
>mm_chr15_90228218_90229233
Length = 1016
Score = 1129 bits (584), Expect = 0.0
Identities = 608/616 (98%)
Strand = Plus / Plus
Query: 1 cacatcatattaaaggccagtgcaaactgttatggcttaagtcagagctgaccaccaggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cacatcatattaaaggccagtgcaaactgttatggcttaagtcagagctgaccaccaggc 260
Query: 61 agaaccttctgtccctgtgtataaactcatagtgggttttgtggctgacgctgaagtatg 120
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 261 agaaccttctgtccctgtgtataaactcatggtgggttttgtggctgacgctgaagtatg 320
Query: 121 ctactaataagccaaaggttatgaatataatactcatgtcctgttatctcaatgttctga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctactaataagccaaaggttatgaatataatactcatgtcctgttatctcaatgttctga 380
Query: 181 aattccccctgttcacctccatccacttcccctcttacctcactcaggatcaatcagctc 240
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aattccccctgttcaccttcatccacttcccctcttacctcactcaggatcaatcagctc 440
Query: 241 aaaggttatttgataatactttgtctagcaagccaaaacatagtgctgctcctctccttg 300
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaaggttagctgataatactttgtctagcaagccaaaacatagtgctgctcctctccttg 500
Query: 301 ccttttcaattcttgaacctgatttttcctataaaaatcctgtcctgaagatagattggt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ccttttcaattcttgaacctgatttttcctataaaaatcctgtcctgaagatagattggt 560
Query: 361 gccacagttaggcacctgattgctttttgtggtcctgatcttaccagtattagggtgtgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gccacagttaggcacctgattgctttttgtggtcctgatcttaccagtattagggtgtgt 620
Query: 421 gctcaataaaactttcatgtttgactgagatctgtattcatgtggcgactctcagacccc 480
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 621 gctcaataaaactttcatgtttgactgagatctgtattcatgtggcaactctcagacccc 680
Query: 481 caacagatatgagggtaagaagagaaaatactaggagtggaatggtctaagtaaggatgg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 caacagatatgagggtaagaagagaaaatactaggagtggaatggtctaagtaaggatgg 740
Query: 541 gtggaggacagaagagggtagggagtgggtaaagagctaacccaaacagaggtggtatga 600
|||||||||||||||||| || |||| |||||||||||||||||||||||||||||||||
Sbjct: 741 gtggaggacagaagaggggagagagtaggtaaagagctaacccaaacagaggtggtatga 800
Query: 601 gaaaaccctcggaaat 616
||||||||||||||||
Sbjct: 801 gaaaaccctcggaaat 816
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 616
Length of database: 1016
Length adjustment: 10
Effective length of query: 606
Effective length of database: 1006
Effective search space: 609636
Effective search space used: 609636
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no463_h18.g1 MSMg01no463_h18.g1 CHROMAT_FILE:
MSMg01no463_h18.g1 PHD_FILE: MSMg01no463_h18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:37:55 2005
(524 letters)
>mm_chr15_90393302_90394225
Length = 924
Score = 938 bits (485), Expect = 0.0
Identities = 513/523 (98%), Gaps = 1/523 (0%)
Strand = Plus / Minus
Query: 1 tttccgctgggtcttccgtgctaaaggcaatctctctgggtttaggtgagcattttatct 60
|||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 tttctgctgggtcttctgtgctaaaggcaatctctctgggtttaggtgagcattttatct 464
Query: 61 tactgctcacacagtacttgaaagtcaggtgcctccgagggcttttgcccaatggttgta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 tactgctcacacagtacttgaaagtcaggtgcctccgagggcttttgcccaatggttgta 404
Query: 121 tcaggtgcacagctgaaaggaacatctgtaagcagctgatatcttccttgtgagcatcca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 tcaggtgcacagctgaaaggaacatctgtaagcagctgatatcttccttgtgagcatcca 344
Query: 181 gccatctcggatgtttgctcatctcctcattctctccatcacttgaagtatgaaattatc 240
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 343 gccatctcggatgtttgctcatctcttcattctctccatcacttgaagtatgaaattatc 284
Query: 241 tctaatgactttagtatgttagagtcttatctccatggaaacttaagctataattaattt 300
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 tcaaatgactttagtatgttagagtcttatctccatggaaacttaagctataattaattt 224
Query: 301 ggccatcacctacttcctcattcaggaattctgtaaacatttctcttttgactttattga 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 223 ggccatcacctacttcctcattcaggaattctgtaaacatttctcttttgacttccttga 164
Query: 361 cccactcattagtctatagtgtgccctttaatctctgaatttatgtcatttctagagact 420
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 163 cccactcattagtctgtagtgtgccctttaatctctgaatttatgtcatttctagagact 104
Query: 421 cttctgttgtgggtgtcaagctttgtttcactgtggtcagagagtatacatggaatcatt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103 cttctgttgtgggtgtcaagctttgtttcactgtggtcagagagtatacatggaatcatt 44
Query: 481 caggggttttggntttgcttttgntttttttt-gtacttactg 522
|||||||||||| |||||||||| |||||||| ||||||||||
Sbjct: 43 caggggttttggttttgcttttgttttttttttgtacttactg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 524
Length of database: 924
Length adjustment: 10
Effective length of query: 514
Effective length of database: 914
Effective search space: 469796
Effective search space used: 469796
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
