Query= MSMg01no464_e24.b1 MSMg01no464_e24.b1 CHROMAT_FILE:
MSMg01no464_e24.b1 PHD_FILE: MSMg01no464_e24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:39:02 2005
(470 letters)
>mm_chr15_34322020_34322889
Length = 870
Score = 783 bits (405), Expect = 0.0
Identities = 455/472 (96%), Gaps = 3/472 (0%)
Strand = Plus / Minus
Query: 1 accttgaactcacagagacctgcttgtctctgactcaataccacccatcaaaaagaggtg 60
|||||||||||| ||||||||||||||||||||||||||||| |||| ||||||||||||
Sbjct: 575 accttgaactcagagagacctgcttgtctctgactcaataccgcccagcaaaaagaggtg 516
Query: 61 tgttctagagcttanattcatatcagagtcttgttcaagcactgacccatttcaatggtc 120
||||| |||||||| | ||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 515 tgttccagagcttaaactcatatcagggtcttgttcaagcactgacccatttcaatggtc 456
Query: 121 tctcttttaatattgtacacatatggatatgtttttgtagttttaggatcatacaacata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 tctcttttaatattgtacacatatggatatgtttttgtagttttaggatcatacaacata 396
Query: 181 gcattaaatcaggagca-tttaagcatatcctttgcatgtataaaacattttaatatctg 239
||||||||||||||||| ||| |||||||| |||||||||||||||||||||||||||||
Sbjct: 395 gcattaaatcaggagcacttt-agcatatcatttgcatgtataaaacattttaatatctg 337
Query: 240 tataatattctgttcattacttggtttaatctgttaaacagctttttgtagtatgttttt 299
||||||||||||| |||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 336 tataatattctgtacattacttggtttaatctgttaaacagctttttgtaataggttttt 277
Query: 300 caaatctgtatgcataaattcttgtgcttttatgttcttaggtttgaaaaagagtggccc 359
||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 276 caaatctgtatgcataaattcttgtgcttttatgttcttaggtttaaaaaagaatggccc 217
Query: 360 ccagaggttcatataattgaatgcttagttg-tagggaatagaactgtttgagaaggatt 418
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 216 ccagaggttcatataattgaatgcttagttgttagggaatagaactgtttgagaaggatt 157
Query: 419 agaaagattaagtggtatgggtttgttggagtagatatggtcttgttggagt 470
|||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 156 agaaagattaagtggtatgggtttgttggagtagatatggccttgttggagt 105
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 470
Length of database: 870
Length adjustment: 10
Effective length of query: 460
Effective length of database: 860
Effective search space: 395600
Effective search space used: 395600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no464_e24.g1 MSMg01no464_e24.g1 CHROMAT_FILE:
MSMg01no464_e24.g1 PHD_FILE: MSMg01no464_e24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:39:02 2005
(348 letters)
>mm_chr15_34162693_34163440
Length = 748
Score = 634 bits (328), Expect = 0.0
Identities = 343/348 (98%)
Strand = Plus / Plus
Query: 1 aagataacaaagtagttagtttgaggtcagcctggaatttatgatactttgtctaaaatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aagataacaaagtagttagtttgaggtcagcctggaatttatgatactttgtctaaaatg 260
Query: 61 gaggagtcactgaagaaggagtcagaggagtagttggagtggaggctgcagcatgactcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaggagtcactgaagaaggagtcagaggagtagttggagtggaggctgcagcatgactcc 320
Query: 121 tcaggtgcacacacaggaaactgaggctaggatgaaggcttggaatcaatcatcatttat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcaggtgcacacacaggaaactgaggctaggatgaaggcttggaatcaatcatcatttat 380
Query: 181 tctccttaaattttctattatttttctgcgtatgagtttttacctgcttgtctatatgtg 240
|||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 381 tctctttaaattttctattatttttctgtgtatgagtttttacctgcttgtctatatgtg 440
Query: 241 ttctcgtgcttttatatgcccatggaggccagaaggtggtgttggatctggaactggagt 300
||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttctcgtgcatttacatgcccatggaggccagaaggtggtgttggatctggaactggagt 500
Query: 301 tagcaggaagccaccaaatgtgggtgctaggaactgaacctgttctgt 348
||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tagcaggaaaccaccaaatgtgggtgctaggaactgaacctgttctgt 548
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 348
Length of database: 748
Length adjustment: 9
Effective length of query: 339
Effective length of database: 739
Effective search space: 250521
Effective search space used: 250521
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
