Query= MSMg01no464_f17.b1 MSMg01no464_f17.b1 CHROMAT_FILE:
MSMg01no464_f17.b1 PHD_FILE: MSMg01no464_f17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:39:06 2005
(588 letters)
>mm_chr15_69382859_69383845
Length = 987
Score = 1081 bits (559), Expect = 0.0
Identities = 580/593 (97%), Gaps = 11/593 (1%)
Strand = Plus / Plus
Query: 1 tgttcccagaatgtctggcatgtgtctctttcctgtaagcttttctcctcatcactacat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgttcccagaatgtctggcatgtgtctctttcctgtaagcttttctcctcatcactacat 260
Query: 61 tatgagttcctcaagggcacagattgaattcttctcattattatgtttcaggaacagcac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tatgagttcctcaagggcacagattgaattcttctcattattatgtttcaggaacagcac 320
Query: 121 acaacaatggcaggaaatctgaatgcctttttatattaccagtagcatatattcaatagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acaacaatggcaggaaatctgaatgcctttttatattaccagtagcatatattcaatagc 380
Query: 181 attgtgccatattattttagcaaatactactaactcgagtaaaacagggatagtcttcaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 attgtgccatattattttagcaaatactactaactcgagtaaaacagggatagtcttcaa 440
Query: 241 aagtgcatttttt-----gcctgattcatccattccaatcatttgtcttctttttttaaa 295
||||||| ||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 441 aagtgca------aaacagcctgattcatccattccaatcatttgtcttcttttttttaa 494
Query: 296 gttctcactttccctttgattttctatttatttcgatatataggaatgttttatgtttgg 355
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 495 gttctcactttccctttgattttctatttatttcaatatataggaatgttttatgtttgg 554
Query: 356 tctttgcattcttattttatattaaggggttaaatgattgtatattttgagtactgactt 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 tctttgcattcttattttatattaaggggttaaatgattgtatattttgagtactgactt 614
Query: 416 agggctgtttccatagatacccgaccataatagctaattagatgagcatgtttgtgaaat 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 agggctgtttccatagatacccgaccataatagctaattagatgagcatgtttgtgaaat 674
Query: 476 cctttgagtggcattttacaataataaatgcccagcttttattcaattagtgcgtttttc 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 cctttgagtggcattttacaataataaatgcccagcttttattcaattagtgcgtttttc 734
Query: 536 ttatttctctcaggcaatactcataaatgctacatgatgtcttgcttcaatag 588
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 ttatttctctcaggcaatactcataaatgctacatgatgtcttgcttcaatag 787
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 588
Length of database: 987
Length adjustment: 10
Effective length of query: 578
Effective length of database: 977
Effective search space: 564706
Effective search space used: 564706
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no464_f17.g1 MSMg01no464_f17.g1 CHROMAT_FILE:
MSMg01no464_f17.g1 PHD_FILE: MSMg01no464_f17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:39:06 2005
(487 letters)
>mm_chr15_69554277_69555163
Length = 887
Score = 934 bits (483), Expect = 0.0
Identities = 486/487 (99%)
Strand = Plus / Minus
Query: 1 tcttaaagagaagggtttgtgatccagaactcttcgttggggtcatctcacttgaaatgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 tcttaaagagaagggtttgtgatccagaactcttcgttggggtcatctcacttgaaatgt 628
Query: 61 tctgtaatcttaacaagaaaagtccaaatacttagcaggcttggggtgaagtgtagtact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 tctgtaatcttaacaagaaaagtccaaatacttagcaggcttggggtgaagtgtagtact 568
Query: 121 gtgcctagaaatgggtctagggccaggggataactgaggaccataaggtggtgatgtcat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 gtgcctagaaatgggtctagggccaggggataactgaggaccataaggtggtgatgtcat 508
Query: 181 gagtaaaagagtgcagcatggaagtgaagagactaaggccgggttagggtactcaccttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 gagtaaaagagtgcagcatggaagtgaagagactaaggccgggttagggtactcaccttg 448
Query: 241 tgtctactagccctgaagaataaaggacaggacatgaaacctttcaatcacttgaggctg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 tgtctactagccctgaagaataaaggacaggacatgaaacctttcaatcacttgaggctg 388
Query: 301 gaagccaacacagaattctcactctatcttaagccagaacccctctccccatggtcagat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 gaagccaacacagaattctcactctatcttaagccagaacccctctccccatggtcagat 328
Query: 361 aaggctggcaaaaaaaaaaaaaatacaccttctctaacacataggaatatgagcagaagt 420
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 327 aaggctggcaaaaaaaaaaaaaatacaccttctccaacacataggaatatgagcagaagt 268
Query: 421 gaagcctggatatttctacttactccaggaaatgatagcatccagtcaaagtaaaagtgt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 gaagcctggatatttctacttactccaggaaatgatagcatccagtcaaagtaaaagtgt 208
Query: 481 tttccaa 487
|||||||
Sbjct: 207 tttccaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 487
Length of database: 887
Length adjustment: 10
Effective length of query: 477
Effective length of database: 877
Effective search space: 418329
Effective search space used: 418329
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
