Query= MSMg01no465_j18.b1 MSMg01no465_j18.b1 CHROMAT_FILE:
MSMg01no465_j18.b1 PHD_FILE: MSMg01no465_j18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:40:47 2005
(171 letters)
>mm_chr15_17072123_17072691
Length = 569
Score = 292 bits (151), Expect = 7e-84
Identities = 163/167 (97%), Gaps = 2/167 (1%)
Strand = Plus / Plus
Query: 5 gaattctatttaatagcacagacaataattttgacagaaaaatataatacatatgtatta 64
||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctatttaaaagtacagacaataattttgacagaaaaatataatacatatgtatta 264
Query: 65 taacttacatataggaaatatactcagtaaatcatgggaagaacaacnttcaaaatctat 124
||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||
Sbjct: 265 taacttacatataggaaatatactcagtaaatcatgg-aagaacaac-ttcaaaatctat 322
Query: 125 caaaagtaatagcttttcagatagcagaggcattgacatgaaaatcc 171
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 caaaagtaatagcttttcagatagcagaggcattgacatgaaaatcc 369
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 171
Length of database: 569
Length adjustment: 8
Effective length of query: 163
Effective length of database: 561
Effective search space: 91443
Effective search space used: 91443
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no465_j18.g1 MSMg01no465_j18.g1 CHROMAT_FILE:
MSMg01no465_j18.g1 PHD_FILE: MSMg01no465_j18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:40:47 2005
(244 letters)
>mm_chr15_17260239_17260882
Length = 644
Score = 441 bits (228), Expect = e-128
Identities = 240/244 (98%)
Strand = Plus / Minus
Query: 1 ttttgtgttttttttaaattcatattttgataaagtcatttttgtgagcatttactaagc 60
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ttttgtgtttttttaaaattcatattttgataaagtcatttttgtgagcatttactaagc 385
Query: 61 cttccttaaaattgagggcagatggaatcaaaggaaatggttgaatttatgtctaaagtc 120
||||||||||||||||||| ||||||| |||||||||||||||| |||||||||||||||
Sbjct: 384 cttccttaaaattgagggcggatggaaccaaaggaaatggttgagtttatgtctaaagtc 325
Query: 121 caacaaaattcaatttagtggtatgtctgtcctggaaaaattgcatataaaagggtgatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 caacaaaattcaatttagtggtatgtctgtcctggaaaaattgcatataaaagggtgatt 265
Query: 181 gggctcaaattctaagaaggaagttccacttttctttagtgggtagaaattgctacaatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gggctcaaattctaagaaggaagttccacttttctttagtgggtagaaattgctacaatt 205
Query: 241 cctc 244
||||
Sbjct: 204 cctc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
