Query= MSMg01no466_i23.b1 MSMg01no466_i23.b1 CHROMAT_FILE:
MSMg01no466_i23.b1 PHD_FILE: MSMg01no466_i23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:42:05 2005
(392 letters)
>mm_chr15_64147210_64148001
Length = 792
Score = 659 bits (341), Expect = 0.0
Identities = 384/407 (94%), Gaps = 15/407 (3%)
Strand = Plus / Minus
Query: 1 tagccgaatcttttcccatttcttctaacaatctgattaccctaatttgacacacgagaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 tagccgaatcttttcccatttcttctaacaatctgattaccctaatttgacacacgagaa 357
Query: 61 aacaaggccagggacagggtggagaaactcgagttccaggaactcgaagcattttgcctt 120
||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||
Sbjct: 356 aacaaggccagggacagagtggagaaactcgagttccaggaacttgaagcattttgcctt 297
Query: 121 tgctggttccatgagggattcgatgagtgcggtggctggctgaagttgtggctcagagca 180
||||||||||| ||| |||| |||||||||||||| ||||||||||||||||||||||||
Sbjct: 296 tgctggttccaggagagattggatgagtgcggtggttggctgaagttgtggctcagagca 237
Query: 181 gcaatggggttccaggcttagagagcacctttgg--------------ctccctaggttt 226
|||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 236 gcaatggggttccaggcttagagagcacctttggctgctcacctcccactccctaggttt 177
Query: 227 ggatcgctgtcagtcctcttgcaagcaagcttctttggttccaaagtagatgggagagcg 286
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 176 ggatcgctgtcagtcctcttgcaagcaagcttctttggttccaaagtagatgggagagcg 117
Query: 287 agccttgtgagtagaaatatgactcggagtcaattcccaggtgacggtggtcagcagcgc 346
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 116 agccttgtgagtagaaatatgactcggagtcaattcccaggtgacggtggtcagcagtgc 57
Query: 347 taatgctgtccataggaacaagcttg-cctgttcttggtgcttcact 392
||||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct: 56 taatggtgtccataggaacaagcttgtcctgttcttggtgcttcact 10
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 392
Length of database: 792
Length adjustment: 9
Effective length of query: 383
Effective length of database: 783
Effective search space: 299889
Effective search space used: 299889
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no466_i23.g1 MSMg01no466_i23.g1 CHROMAT_FILE:
MSMg01no466_i23.g1 PHD_FILE: MSMg01no466_i23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:42:05 2005
(369 letters)
>mm_chr15_63922901_63923669
Length = 769
Score = 714 bits (369), Expect = 0.0
Identities = 369/369 (100%)
Strand = Plus / Plus
Query: 1 atgctgatgttgagaaatggaaacaaggcttgtgtttgtggacacaattgtgattgtgtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atgctgatgttgagaaatggaaacaaggcttgtgtttgtggacacaattgtgattgtgtc 260
Query: 61 atttaacattccaacggcgtgtgaggaagccactgtgctctctttcctgaaggtctgagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atttaacattccaacggcgtgtgaggaagccactgtgctctctttcctgaaggtctgagg 320
Query: 121 actggcttaagggctgagctggcatggggccatggcctcttgcctcctggctcagagagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 actggcttaagggctgagctggcatggggccatggcctcttgcctcctggctcagagagc 380
Query: 181 gacagaggtgagagcagcagttcacctctagagccaggcctgacctggaattagctctgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gacagaggtgagagcagcagttcacctctagagccaggcctgacctggaattagctctgt 440
Query: 241 ggccatgcactgtgacccaagctcttgaacaactagaaagtacacacaaaaagttggctg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggccatgcactgtgacccaagctcttgaacaactagaaagtacacacaaaaagttggctg 500
Query: 301 tcataggacatcacgggcagagtgcaccctaaatgttcttggtgcgttttccagggaaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tcataggacatcacgggcagagtgcaccctaaatgttcttggtgcgttttccagggaaga 560
Query: 361 tggtctctt 369
|||||||||
Sbjct: 561 tggtctctt 569
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 369
Length of database: 769
Length adjustment: 9
Effective length of query: 360
Effective length of database: 760
Effective search space: 273600
Effective search space used: 273600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
