Query= MSMg01no467_p16.b1 MSMg01no467_p16.b1 CHROMAT_FILE:
MSMg01no467_p16.b1 PHD_FILE: MSMg01no467_p16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:44:00 2005
(243 letters)
>mm_chr15_78822176_78822818
Length = 643
Score = 373 bits (193), Expect = e-108
Identities = 229/241 (95%)
Strand = Plus / Plus
Query: 1 ctgctgcccagttgcagactaaagtgctctgcaagaatgaccctgaggtgtgcagtgcag 60
|||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||
Sbjct: 201 ctgctgcccagttgcagactaaagcgctctgcaagaatgacccagaggtgtgcagtgcag 260
Query: 61 gtctcatgcacagcccagcagcttggtcatcaggtcagagggtacagctgaactgcagag 120
|||||||| |||||||||||||||| |||||||||||||||| |||||||||||||||||
Sbjct: 261 gtctcatgtacagcccagcagcttgatcatcaggtcagagggcacagctgaactgcagag 320
Query: 121 aaggccctttagagggagttgcttctacccaccccctagaaagcagtcctgtgatctctt 180
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | |
Sbjct: 321 aaggccctttagagggagttgcttctacccaccccctagaaagcagtcctgtaatcacat 380
Query: 181 tactttggggaatgctgggaaatgtagtttggagctgaatgacagtgaacacagctgagc 240
| ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgcttcagggaatgctgggaaatatagtttggagctgaatgacagtgaacacagctgagc 440
Query: 241 t 241
|
Sbjct: 441 t 441
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 243
Length of database: 643
Length adjustment: 9
Effective length of query: 234
Effective length of database: 634
Effective search space: 148356
Effective search space used: 148356
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no467_p16.g1 MSMg01no467_p16.g1 CHROMAT_FILE:
MSMg01no467_p16.g1 PHD_FILE: MSMg01no467_p16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:44:00 2005
(533 letters)
>mm_chr15_79049989_79050924
Length = 936
Score = 967 bits (500), Expect = 0.0
Identities = 526/536 (98%), Gaps = 3/536 (0%)
Strand = Plus / Minus
Query: 1 attcattcaataatgaactgtgttgacagattacatattaagccaggcttggatttctag 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 736 attcattcaataatgaactgtgttgacagattacatattaagccaggcttggatttttag 677
Query: 61 gatgtatatctgcccttctgcctgcctgaatctgtgctaca---tattcaggagtgttaa 117
|||||||||||| ||||||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 676 gatgtatatctgtccttctgcctgcctgaatctgcactacatcttattcaggagtgttaa 617
Query: 118 tattggaggaccggacatctcatttcacagtaggcttgttccctgcatgccattgaacat 177
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 616 tattggaggaccggacatctcatttcacagtaggcttgttccctgcgtgccattgaacat 557
Query: 178 actgtggaggggacaagaacagcctctacctatgacctccctgcctgcctctgtctccag 237
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 556 actgtggaggggacaagaacagcctctacctatgacctccctgcctgcctctgtcttcag 497
Query: 238 cttttccagtcttgcatctcatactgctctggcttgaagcacttggccccatgaatgctc 297
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 cttttccagtcttgcctctcatactgctctggcttgaagcacttggccccatgaatgctc 437
Query: 298 ctgcaggtaccaaagtgtgagatgctctctcttgctcaaactctcagcagctatgaagct 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 ctgcaggtaccaaagtgtgagatgctctctcttgctcaaactctcagcagctatgaagct 377
Query: 358 agagagcctgtgagctcaagctctagagaagcccacagagctgtgaccctctccaaacct 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 agagagcctgtgagctcaagctctagagaagcccacagagctgtgaccctctccaaacct 317
Query: 418 cactgaagagagaatcgggatggaatcctgccctccctcctcctgcagaggaagtggcta 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 cactgaagagagaatcgggatggaatcctgccctccctcctcctgcagaggaagtggcta 257
Query: 478 aggaggggacagggtcaggggttaatgacagcattgtgctgggtgggggctgtgga 533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 aggaggggacagggtcaggggttaatgacagcattgtgctgggtgggggctgtgga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 533
Length of database: 936
Length adjustment: 10
Effective length of query: 523
Effective length of database: 926
Effective search space: 484298
Effective search space used: 484298
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
