Query= MSMg01no468_f15.b1 MSMg01no468_f15.b1 CHROMAT_FILE:
MSMg01no468_f15.b1 PHD_FILE: MSMg01no468_f15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:44:32 2005
(247 letters)
>mm_chr15_51800961_51801607
Length = 647
Score = 431 bits (223), Expect = e-125
Identities = 241/247 (97%)
Strand = Plus / Plus
Query: 1 ctagtatgtgtctgggggtgtggaggggcatttccactgagccttgtctctactgcagga 60
|||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 201 ctagtatgtgtctgggggtgtggaggggcatttctactgagccaggtctctactgcagga 260
Query: 61 gcagcagagctaactgcagagtggaagcacccaccggctctgaagccagtgagactattg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcagcagagctaactgcagagtggaagcacccaccggctctgaagccagtgagactattg 320
Query: 121 agctgtgtactaatccccacaatggcattctacacctgggaaaaacacatcccatcagta 180
|||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agctgtgtactaattcccacgatggcattctacacctgggaaaaacacatcccatcagta 380
Query: 181 cttgagccaagctgccctaagcataccgtgatttaaggtagaaaagaagaagcacgtatc 240
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cgtgagccaagctgccctaagcataccgtgatttaaggtagaaaagaagaagcacgtatc 440
Query: 241 agtttga 247
|||||||
Sbjct: 441 agtttga 447
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 247
Length of database: 647
Length adjustment: 9
Effective length of query: 238
Effective length of database: 638
Effective search space: 151844
Effective search space used: 151844
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no468_f15.g1 MSMg01no468_f15.g1 CHROMAT_FILE:
MSMg01no468_f15.g1 PHD_FILE: MSMg01no468_f15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:44:32 2005
(421 letters)
>mm_chr15_51944060_51944879
Length = 820
Score = 799 bits (413), Expect = 0.0
Identities = 419/421 (99%), Gaps = 1/421 (0%)
Strand = Plus / Minus
Query: 1 tggctaccgaatgtctacccactacagttaccagctaggtgtgatctctgatcatcacga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 tggctaccgaatgtctacccactacagttaccagctaggtgtgatctctgatcatcacga 561
Query: 61 ttcccgtctaaatcagaaatctccattaataaccacagccattctttgttcatattactt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ttcccgtctaaatcagaaatctccattaataaccacagccattctttgttcatattactt 501
Query: 121 tcaagactactatgctccacacagtagatagctggattgtccactgctcttcccagcttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tcaagactactatgctccacacagtagatagctggattgtccactgctcttcccagcttc 441
Query: 181 tctcatcatggctcttctgtggctaccataccctagaaagaaatccataaggagaaaggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tctcatcatggctcttctgtggctaccataccctagaaagaaatccataaggagaaaggg 381
Query: 241 ggttcttctctatataagataaaagaaacatgggccatgaaggagaagggttgtgggtct 300
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ggttcttctcta-ataagataaaagaaacatgggccatgaaggagaagggttgtgggtct 322
Query: 301 tttcttcttcttctttctgcttgagagcagagtgaaatcattgaagtacagtccctgcag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttcttcttcttctttctgcttgagagcagagtgaaatcattgaagtacagtccctgcag 262
Query: 361 ccatcttgtaactataaaagaaaagccaccggaatctagtaaaatagactcagatggctg 420
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 261 ccatcttgtaactataaaagaaaagccacaggaatctagtaaaatagactcagatggctg 202
Query: 421 g 421
|
Sbjct: 201 g 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 421
Length of database: 820
Length adjustment: 9
Effective length of query: 412
Effective length of database: 811
Effective search space: 334132
Effective search space used: 334132
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
