Query= MSMg01no468_k08.b1 MSMg01no468_k08.b1 CHROMAT_FILE:
MSMg01no468_k08.b1 PHD_FILE: MSMg01no468_k08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:44:56 2005
(426 letters)
>mm_chr7_84613442_84614267
Length = 826
Score = 743 bits (384), Expect = 0.0
Identities = 390/392 (99%)
Strand = Plus / Minus
Query: 35 acacacacacacacacacacacaattacacatgtaccaatgatctcacctcacatgtgtt 94
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 acacacacacacacacacacacaattacacatgtaccaatgatctcacctcacatgtgtt 590
Query: 95 gtgagtcatacttgtgcacatatggtataatttcagatcaccatcctgctatgtttgaga 154
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 gtgagtcatacttgtgcacatatggtataatttcagatcaccatcctgctatgtttgaga 530
Query: 155 tgcaatcattctttcaatgatgtctacaatctaacttcagatatatcttccagtatcgta 214
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 tgcaatcattctttcaatgatgtctacaatctaacttcagatatatcttccagtatcgta 470
Query: 215 ttgtactcattgtatttatgactttcttaatcatttcacttatgtacaactgtgtcacta 274
||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 ttgcactcactgtatttatgactttcttaatcatttcacttatgtacaactgtgtcacta 410
Query: 275 tgctcattatatcttccctatatcttggtatattgccatagactttgaaatggaatgggt 334
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 tgctcattatatcttccctatatcttggtatattgccatagactttgaaatggaatgggt 350
Query: 335 tttatttttcttaattttctctgtataatttttaatatttcactatgctggtttcgttgg 394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 tttatttttcttaattttctctgtataatttttaatatttcactatgctggtttcgttgg 290
Query: 395 caatctgacagctttgaatatgctgcatagag 426
||||||||||||||||||||||||||||||||
Sbjct: 289 caatctgacagctttgaatatgctgcatagag 258
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 42
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 426
Length of database: 826
Length adjustment: 9
Effective length of query: 417
Effective length of database: 817
Effective search space: 340689
Effective search space used: 340689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no468_k08.g1 MSMg01no468_k08.g1 CHROMAT_FILE:
MSMg01no468_k08.g1 PHD_FILE: MSMg01no468_k08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:44:56 2005
(445 letters)
>mm_chr15_56685285_56686129
Length = 845
Score = 801 bits (414), Expect = 0.0
Identities = 438/446 (98%), Gaps = 2/446 (0%)
Strand = Plus / Minus
Query: 1 agtttgagcttctgctatgaattgttctggtgaatctgcctcatatgacattcctgatat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 agtttgagcttctgctatgaattgttctggtgaatctgcctcatatgacattcctgatat 586
Query: 61 gacttataaaaattttaaggtacttcttacttgacatatgcctatttgatatcatacttt 120
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 585 gacttataaaaattttaaggtacttcttacttgacatatgcctatttgatattatacttt 526
Query: 121 tgaagcaatcctttttcgactgagtcataatatctgtcaatcaactaccactgctttcta 180
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 tgaagcaatcctttttcaactgagtcataatatctgtcaatcaactaccactgctttcta 466
Query: 181 cttttgtaagattaagaaaagcaaaagccagg-tgatctatttttctataaaaggcatat 239
|||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 465 cttttgtaagattaagaaaagcaaaagccaggcgga-ctatttttctataaaaggcatat 407
Query: 240 gaaataaatgccttcttattactcaagctacagttctgaataattatggcaaagcagaat 299
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 gaaataaatgccttcaaattactcaagctacagttctgaataattatggcaaagcagaat 347
Query: 300 gaacactcacactactaagtattagaagacagagactttgattattttgatgtatgatct 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 gaacactcacactactaagtattagaagacagagactttgattattttgatgtatgatct 287
Query: 360 taaaaacatcaactagataaacatttcctgtgtaccaactttattctaaagtctagtcaa 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 taaaaacatcaactagataaacatttcctgtgtaccaactttattctaaagtctagtcaa 227
Query: 420 ggttctagagattgcttgaggagtac 445
||||||||||||||||||| ||||||
Sbjct: 226 ggttctagagattgcttgaagagtac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 445
Length of database: 845
Length adjustment: 10
Effective length of query: 435
Effective length of database: 835
Effective search space: 363225
Effective search space used: 363225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
