Query= MSMg01no469_b23.b1 MSMg01no469_b23.b1 CHROMAT_FILE:
MSMg01no469_b23.b1 PHD_FILE: MSMg01no469_b23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:45:35 2005
(417 letters)
>mm_chr15_59589224_59590040
Length = 817
Score = 733 bits (379), Expect = 0.0
Identities = 400/407 (98%), Gaps = 1/407 (0%)
Strand = Plus / Minus
Query: 5 gaattcaaccctgttaccccttgtaaagacagacagtcgtaaactatcttcacaaagttt 64
||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 gaattcaaccctgggagcccttgtaaagacagacagtcgtaaactatcttcacaaagttt 411
Query: 65 tcctctactctccacatacatattgtgacacacacaaccatcaacacacacatgtacaca 124
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 410 tcctctactctccacatacatattgtgacaaacacaaccatcaacacacacatgtacaca 351
Query: 125 caaataatcatttaattttaagaaaaagaaagcattacagcttatccaaatgccagatgc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 caaataatcatttaattttaagaaaaagaaagcattacagcttatccaaatgccagatgc 291
Query: 185 aattctcaggcttcctcccttttccctgccccattctcaccaagtgactggatcaccctg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 aattctcaggcttcctcccttttccctgccccattctcaccaagtgactggatcaccctg 231
Query: 245 tgtgactggtgccttttaagtcagctatcctagcactcgggaggcagaggcaggcggatt 304
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 230 tgtgactggtgccttttaagtcagctatcctagcactcgggaggcagaggcaggtggatt 171
Query: 305 tctgagttcaaggccagcctggtctacaaagtgagttccaggacagccagggctatatag 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 170 tctgagttcaaggccagcctggtctacaaagtgagttccaggacagccagggctatacag 111
Query: 365 aaaaaccctgtctcaaaaaaacaagaagaag-aagaagaagaagaag 410
||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 110 aaaaaccctgtctcaaaaaaacaagaagaagaaagaagaagaagaag 64
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 41
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 417
Length of database: 817
Length adjustment: 9
Effective length of query: 408
Effective length of database: 808
Effective search space: 329664
Effective search space used: 329664
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no469_b23.g1 MSMg01no469_b23.g1 CHROMAT_FILE:
MSMg01no469_b23.g1 PHD_FILE: MSMg01no469_b23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:45:35 2005
(410 letters)
>mm_chr15_59428853_59429662
Length = 810
Score = 741 bits (383), Expect = 0.0
Identities = 404/411 (98%), Gaps = 2/411 (0%)
Strand = Plus / Plus
Query: 1 acatcaaagtgccaagtgtgatagctcacttgtatcccggcactgggag-gggaagggag 59
||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||
Sbjct: 201 acatcaaagtgccaagtgtgatagctcacttgtatcccggcactgggagaggga-gggag 259
Query: 60 atgaaaggcaggcaggcccctgaggtcagtgaggccagccagactagtggctgtttagca 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 atgaaaggcaggcaggcccctgaggtcagtgaggccagccagactagtggctgtttagca 319
Query: 120 agaattaggccagtgaaagagtctgtcagaaataaataactagtacagtggaccctgagg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 agaattaggccagtgaaagagtctgtcagaaataaataactagtacagtggaccctgagg 379
Query: 180 agaacgacagggatgacctctgactcccacagcatatacacatgtgcacagctgcacaca 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 agaacgacagggatgacctctgactcccacagcatatacacatgtgcacagctgcacaca 439
Query: 240 ggcgggcagaagctctggcctgacaggaagtttgctggtgtacagtgtgaactcacagct 299
||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ggcgggcagaagcacaggcctgacaggaagtttgctggtgtacagtgtgaactcacagct 499
Query: 300 gtggggcccttatggcaaacagtcatcatgtgtacctcactgttttgtgacacatcaccc 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gtggggcccttatggcaaacagtcatcatgtgtacctcactgttttgtgacacatcaccc 559
Query: 360 tggacttggaggcgatgggacagagttactgtctgagtgtagctatgtcag 410
|||||||||||||||||||||| ||||||| |||||||||| |||||||||
Sbjct: 560 tggacttggaggcgatgggacacagttactctctgagtgtaactatgtcag 610
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 410
Length of database: 810
Length adjustment: 9
Effective length of query: 401
Effective length of database: 801
Effective search space: 321201
Effective search space used: 321201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
