Query= MSMg01no469_h11.b1 MSMg01no469_h11.b1 CHROMAT_FILE:
MSMg01no469_h11.b1 PHD_FILE: MSMg01no469_h11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:46:04 2005
(477 letters)
>mm_chr15_34236609_34237484
Length = 876
Score = 808 bits (418), Expect = 0.0
Identities = 436/442 (98%), Gaps = 1/442 (0%)
Strand = Plus / Minus
Query: 36 tcaccagcagtaagagacttttagaactattctctgtacttcaatgaaatctcatttaat 95
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 875 tcactagcagtaagagacttttagaactattctctgtacttcaatgaaatctcatttaat 816
Query: 96 cctgtaggcattataatcctctctagatgcatgagaaaattgaggcattgtgttgctggt 155
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 815 cctgtaggcattataatcccctctagatgcatgagaaaattgaggcattgtgttgctggt 756
Query: 156 tgtctccaagtactccagcctgtaaacttggccgctggggtttgaacgaggcctgctgat 215
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 755 tgtctccaagtactccagcctgtaaacttggcagctggggtttgaacgaggcctgctgat 696
Query: 216 tcccaaacctctgtcctttacccttacagcttctgttgtccattcctcaaaggctaatgg 275
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 695 tcccaaacctctgtcctttacccttacagcttc-gttgtccattcctcaaaggctaatgg 637
Query: 276 gaattgcatcctgtagatgcactgtgggagcgccacagtgattactgtacagtatctcca 335
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 gaattgcatcctgtagatgcactgtgggagcgccacagtgattactgtacagtatctcca 577
Query: 336 gaacaccaactccgggagaccttacaagggtttgtccccatatttttctgtcctctcccc 395
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 gaacaccaactccgggagaccttacaagggtttgtccccatatttttctgtcctctcccc 517
Query: 396 aaactgtcctccagttttccagcaacacaaaatgccctcttcttatccctcttccgaaat 455
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 aaactgtcgtccagttttccagcaacacaaaatgccctcttcttatccctcttccgaaat 457
Query: 456 acaaggaagccggagctggaca 477
||||||||||| ||||||||||
Sbjct: 456 acaaggaagccagagctggaca 435
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 477
Length of database: 876
Length adjustment: 10
Effective length of query: 467
Effective length of database: 866
Effective search space: 404422
Effective search space used: 404422
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no469_h11.g1 MSMg01no469_h11.g1 CHROMAT_FILE:
MSMg01no469_h11.g1 PHD_FILE: MSMg01no469_h11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:46:04 2005
(466 letters)
>mm_chr15_34060874_34061739
Length = 866
Score = 833 bits (431), Expect = 0.0
Identities = 458/467 (98%), Gaps = 1/467 (0%)
Strand = Plus / Plus
Query: 1 ttctagggcacagaggcaggcactattgagtctcagaaaggaggtggtattgaacactat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttctagggcacagaggcaggcactattgagtctcagaaaggaggtggtattgaacactat 260
Query: 61 aagaaacagagtggttagacctaaagattgtctgtgtacttttcattacaaagtttggaa 120
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 261 aagaaacagagtggttagacctaaagattgtctgtgtgcttttcattacaaagtttggaa 320
Query: 121 tcagggttgagggtgtagctctgtggaagagcatgtgctgagcatgtacaaggccctgag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcagggttgagggtgtagctctgtggaagagcatgtgctgagcatgtacaaggccctgag 380
Query: 181 ttcagtcctcagtatcaaaaagattaagagaatcctggacttaaagccatatttcataaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttcagtcctcagtatcaaaaagattaagagaatcctggacttaaagccatatttcataaa 440
Query: 241 gttaatta-ttattagattattattagggtttggagaggtggctcaagttttaagaatac 299
||||| | ||| |||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 441 gttaagaagttaagagattattattagggtttggagaggtggctcaagggttaagaatac 500
Query: 300 tggctactcttaggactggatttgattcccaacacccacatggtggcctacaaccgtctg 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tggctactcttaggactggatttgattcccaacacccacatggtggcctacaaccgtctg 560
Query: 360 taattccagtcccaagttatccaacacctcagatagagcaatgctgcacaagcaggtaaa 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 taattccagtcccaagttatccaacacctcagatagagcaatgctgcacaagcaggtaaa 620
Query: 420 atacccatccatacacctaaaataaataattttctttaaaaagaagt 466
|||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 621 atacccatccatacacataaaataaataattttctttaaaaagaagt 667
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 466
Length of database: 866
Length adjustment: 10
Effective length of query: 456
Effective length of database: 856
Effective search space: 390336
Effective search space used: 390336
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
