Query= MSMg01no469_h12.b1 MSMg01no469_h12.b1 CHROMAT_FILE:
MSMg01no469_h12.b1 PHD_FILE: MSMg01no469_h12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:46:04 2005
(527 letters)
>mm_chr15_7444360_7445286
Length = 927
Score = 959 bits (496), Expect = 0.0
Identities = 519/532 (97%), Gaps = 10/532 (1%)
Strand = Plus / Plus
Query: 1 cagctctgccccatactattcatttttagttcaagttcaaaatcctgaaggtagagattc 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cagctctgccccatactatccatttttagttcaagttcaaaatcctgaaggtagagattc 260
Query: 61 agctgatatgctgaaagccctcctactctggcattcagtaaactactttataatccactg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agctgatatgctgaaagccctcctactctggcattcagtaaactactttataatccactg 320
Query: 121 tagagcattcataaacacttcctgaatggtatacagtcaaactgaatgtctagctaccac 180
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 321 tagagcattcataaacacttcctgaatggtatacagtcaaactgaatgtctacctaccac 380
Query: 181 ttcataatactcgtaattatttttcttaggctatctgtgataggtgttgatcggctctaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttcataatactcgtaattatttttcttaggctatctgtgataggtgttgatcggctctaa 440
Query: 241 cta-----tttttttatttcatggatcaaagacaatttgaaaatggtgttaccccttctt 295
| | || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ccagaaactt-----atttcatggatcaaagacaatttgaaaatggtgttaccccttctt 495
Query: 296 tttgagtttcaggtgaccttgatgttactaaagtttcacaagagtgacaagtccatttga 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 tttgagtttcaggtgaccttgatgttactaaagtttcacaagagtgacaagtccatttga 555
Query: 356 gcagaggtttggatgtggccttagacttggatattgctccatatatagacatacatgcac 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 gcagaggtttggatgtggccttagacttggatattgctccatatatagacatacatgcac 615
Query: 416 atatacagtgcatttatacatacatatacactgggcatgcaagagatggggagaacactg 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 atatacagtgcatttatacatacatatacactgggcatgcaagagatggggagaacactg 675
Query: 476 gaggaagtcaagagatgccaatctccatatcaggtgtgtccccgccctgcca 527
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 gaggaagtcaagagatgccaatctccatatcaggtgtgtccccgccctgcca 727
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 527
Length of database: 927
Length adjustment: 10
Effective length of query: 517
Effective length of database: 917
Effective search space: 474089
Effective search space used: 474089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no469_h12.g1 MSMg01no469_h12.g1 CHROMAT_FILE:
MSMg01no469_h12.g1 PHD_FILE: MSMg01no469_h12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:46:04 2005
(181 letters)
>mm_chr15_7541581_7542161
Length = 581
Score = 306 bits (158), Expect = 7e-88
Identities = 173/178 (97%)
Strand = Plus / Minus
Query: 4 actcagtgtgtgatagagggctcaagtaatgtgcaagtgacatcctgctccccccatttc 63
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 381 actcagtgtgtgatagagggctcaagtaatgtgcaagtgacatcctactccccccatttc 322
Query: 64 tccctgggctcttgagtatttggaacagactgtactctaagctatggaaaatggggctat 123
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tccccgggctcttgagtatttggaacagactgtactctaagctatggaaaatggggctat 262
Query: 124 gttacagtgttctaactggctactgcacttagatatgtagggacttgtaaggcaaaag 181
| ||||||||||||||||||||||| |||| |||||||||||||||||||||||||||
Sbjct: 261 ggtacagtgttctaactggctactgtacttggatatgtagggacttgtaaggcaaaag 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 181
Length of database: 581
Length adjustment: 8
Effective length of query: 173
Effective length of database: 573
Effective search space: 99129
Effective search space used: 99129
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
