Query= MSMg01no469_l23.b1 MSMg01no469_l23.b1 CHROMAT_FILE:
MSMg01no469_l23.b1 PHD_FILE: MSMg01no469_l23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:46:26 2005
(401 letters)
>mm_chr15_6537912_6538711
Length = 800
Score = 692 bits (358), Expect = 0.0
Identities = 390/406 (96%), Gaps = 11/406 (2%)
Strand = Plus / Minus
Query: 1 acaccctgtcctcctgccccttccccgccaaaaagtggtctgtgtgctctgcatgtctct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 acaccctgtcctcctgccccttccccgccaaaaagtggtctgtgtgctctgcatgtctct 541
Query: 61 gtctcatcagtcctctgctacccacagagaaacacaagcacagttgccaggagagccgag 120
||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 540 gtctcgtcagtcctctgctacccacagagaaacacaagcgcagttgccaggagagccgag 481
Query: 121 gagctgttgtgtagagcagtgcagctgtagaaacatggctgctgcctgtagcacagaagt 180
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||
Sbjct: 480 gagctgttgtgtagagcagtgcagctgtagaaacatggctgctgcctggagcacagacgt 421
Query: 181 tgactcaacaatgcagctcctttctctgggggaaagaaaaacctcctatggttttgggtt 240
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 420 tgactcaacaatgcagctcctttctc-gggggaaagaaaaacctcctatggttttgggtt 362
Query: 241 caggtttttttctgtattttta-----tgttgcccgtttggttacagtttgctgatagta 295
|||||||||||||||| | |||||||||||||||||||||||||||||||||
Sbjct: 361 caggtttttttctgta-----agcagatgttgcccgtttggttacagtttgctgatagta 307
Query: 296 tctattgctactgggggctctagaaggagtttccacttttgacatgtcaagcagaattaa 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 tctattgctactgggggctctagaaggagtttccacttttgacatgtcaagcagaattaa 247
Query: 356 gcctcatcttttctcctcctactggagacattaaaacagaatagaa 401
||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 gcctcttcttttctcctcctactggagacattaaaacagaatagaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 401
Length of database: 800
Length adjustment: 9
Effective length of query: 392
Effective length of database: 791
Effective search space: 310072
Effective search space used: 310072
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no469_l23.g1 MSMg01no469_l23.g1 CHROMAT_FILE:
MSMg01no469_l23.g1 PHD_FILE: MSMg01no469_l23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:46:26 2005
(250 letters)
>mm_chr15_6356383_6357032
Length = 650
Score = 453 bits (234), Expect = e-132
Identities = 246/250 (98%)
Strand = Plus / Plus
Query: 1 tatcccagctaccaatgataagtggtatggctaagattgtgttctttgaacaaagcattc 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 201 tatcccagctaccaatgataagtggtatggctaagattgtgttctttgaagaaagcattc 260
Query: 61 aagtgacacaggtagctttgctgtgactggcccagcaacagcgtcacagggtggagaagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aagtgacacaggtagctttgctgtgactggcccagcaacagcgtcacagggtggagaagg 320
Query: 121 aggactcgggggcatcctgacatgttcccgtggactctctggtcaaaaagcattcacatt 180
|||||||||||||||||||||| |||||| |||||||||| |||||||||||||||||||
Sbjct: 321 aggactcgggggcatcctgacacgttcccatggactctctcgtcaaaaagcattcacatt 380
Query: 181 gtgcttcttacgcactagcgactatattagagacccaaagtactaaagtctcatttcaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtgcttcttacgcactagcgactatattagagacccaaagtactaaagtctcatttcaca 440
Query: 241 ggggttagag 250
||||||||||
Sbjct: 441 ggggttagag 450
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 250
Length of database: 650
Length adjustment: 9
Effective length of query: 241
Effective length of database: 641
Effective search space: 154481
Effective search space used: 154481
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
