MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-470G06
Chromosome	15 (Build37)
Map Location	9,025,652 - 9,025,863
singlet/doublet	singlet
Overlap gene	1110020G09Rik
Upstream gene	Wdr70, Nup155, 2410089E03Rik, LOC100039599, Nipbl, EG666437, LOC100039560, LOC100039633, Slc1a3, EG622770, LOC268781, LOC382969, LOC100039619, Ranbp3l
Downstream gene	Skp2, Lmbrd2, LOC666503, Ugt3a1, LOC100039661, Ugt3a2, LOC383094, Capsl, Il7r, C230086A09Rik
Link	Open Mouse BAC browser

Click to get alignment info.

name	Wdr70 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:545085 MGI:1921020
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Nup155 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:170762 MGI:2181182
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2410089E03Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73692 MGI:1920942
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 42 ESTs

name	LOC100039599 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039599
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 40 ESTs, 1 Protein pseudo : _no_value

name	Nipbl (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71175 MGI:1913976
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	EG666437 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666437 MGI:3648999
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	LOC100039560 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039560
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	LOC100039633 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039633
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 1 Protein

name	Slc1a3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20512 MGI:99917
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG622770 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:622770 MGI:3644431
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	LOC268781 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:268781
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 3 Proteins pseudo : _no_value

name	LOC382969 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:382969
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 15 ESTs, 6 Proteins pseudo : _no_value

name	LOC100039619 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039619
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 16 ESTs, 1 Protein

name	Ranbp3l (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:223332 MGI:2444654
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1110020G09Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68646 MGI:1915896
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Skp2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:27401 MGI:1351663
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Lmbrd2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320506 MGI:2444173
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC666503 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666503
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Ugt3a1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:105887 MGI:2146055
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039661 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039661
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 33 ESTs, 2 Proteins pseudo : _no_value

name	Ugt3a2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:223337 MGI:2145969
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC383094 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:383094
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 Proteins pseudo : _no_value

name	Capsl (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75568 MGI:1922818
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Il7r (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16197 MGI:96562
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	C230086A09Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320277 MGI:2443727
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Wdr70 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487148 GeneID:545085 MGI:1921020
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : WD repeat domain 70 transcript_id : NM_001081402.1

name	Nup155 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31559997 GeneID:170762 MGI:2181182
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nucleoporin 155 transcript_id : NM_133227.2

name	Nipbl (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:49169844 GeneID:71175 MGI:1913976
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Nipped-B homolog (Drosophila) transcript_id : NM_027707.2

name	Nipbl (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:51371927 GeneID:71175 MGI:1913976
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Nipped-B homolog (Drosophila) transcript_id : NM_201232.1

name	EG666437 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94398410 GeneID:666437 MGI:3648999
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : predicted gene, EG666437 transcript_id : XM_983841.1

name	LOC100039560 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149266390 GeneID:100039560
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : similar to Keratin associated protein 10-4 transcript_id : XM_001473114.1

name	LOC100039633 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149266399 GeneID:100039633
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 1 Protein product : similar to 2900006F19Rik protein transcript_id : XM_001473194.1

name	Slc1a3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40254195 GeneID:20512 MGI:99917
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 1 (glial high affinity glutamate transporter), member 3 transcript_id : NM_148938.2

name	EG622770 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149266393 GeneID:622770 MGI:3644431
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : predicted gene, EG622770 transcript_id : XM_897306.3

name	LOC100039619 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149266397 GeneID:100039619
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 16 ESTs, 1 Protein product : similar to RAN binding protein 3-like transcript_id : XM_001473207.1

name	Ranbp3l (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:37574123 GeneID:223332 MGI:2444654
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RAN binding protein 3-like transcript_id : NM_198024.1

name	1110020G09Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:144226207 GeneID:68646 MGI:1915896
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1110020G09 gene transcript_id : NM_001040395.2

name	Skp2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:70909358 GeneID:27401 MGI:1351663
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : S-phase kinase-associated protein 2 (p45) transcript_id : NM_013787.2

name	Skp2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:70909362 GeneID:27401 MGI:1351663
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : S-phase kinase-associated protein 2 (p45) transcript_id : NM_145468.1

name	Lmbrd2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31581567 GeneID:320506 MGI:2444173
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : LMBR1 domain containing 2 transcript_id : NM_177178.3

name	Ugt3a1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46402180 GeneID:105887 MGI:2146055
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : UDP glycosyltransferases 3 family, polypeptide A1 transcript_id : NM_207216.1

name	Ugt3a2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142365155 GeneID:223337 MGI:2145969
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : UDP glycosyltransferases 3 family, polypeptide A2 transcript_id : NM_144845.3

name	Capsl (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21312981 GeneID:75568 MGI:1922818
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : calcyphosine-like transcript_id : NM_029341.1

name	Il7r (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:45269151 GeneID:16197 MGI:96562
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : interleukin 7 receptor transcript_id : NM_008372.3

name	C230086A09Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:125991757 GeneID:320277 MGI:2443727
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA C230086A09 gene transcript_id : NM_177123.3

name	Wdr70 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487149 GeneID:545085 MGI:1921020
definition	codon_start : 1 product : WD repeat domain 70 protein_id : NP_001074871.1

name	Nup155 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31559998 GeneID:170762 MGI:2181182
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005643 - nuclear pore [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA]; GO:0019867 - outer membrane [Evidence IEA] GO_function : GO:0005487 - nucleocytoplasmic transporter activity [Evidence IEA]; GO:0015288 - porin activity [Evidence IEA]; GO:0017056 - structural constituent of nuclear pore [Evidence IEA] GO_process : GO:0006913 - nucleocytoplasmic transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation product : nucleoporin 155 protein_id : NP_573490.2

name	Nipbl (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:49169845 GeneID:71175 MGI:1913976
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005488 - binding [Evidence IEA] GO_process : GO:0007049 - cell cycle [Evidence IEA] codon_start : 1 note : isoform A is encoded by transcript variant A product : delangin isoform A protein_id : NP_081983.2

name	Nipbl (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51371928 GeneID:71175 MGI:1913976
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005488 - binding [Evidence IEA] GO_process : GO:0007049 - cell cycle [Evidence IEA] codon_start : 1 note : isoform B is encoded by transcript variant B product : delangin isoform B protein_id : NP_957684.1

name	EG666437 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94398411 GeneID:666437 MGI:3648999
definition	codon_start : 1 product : hypothetical protein protein_id : XP_988935.1

name	LOC100039560 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149266391 GeneID:100039560
definition	codon_start : 1 product : similar to Keratin associated protein 10-4 protein_id : XP_001473164.1

name	LOC100039633 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149266400 GeneID:100039633
definition	codon_start : 1 product : similar to 2900006F19Rik protein protein_id : XP_001473244.1

name	Slc1a3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:24233554 CCDS:CCDS27373.1 GeneID:20512 MGI:99917
definition	GO_component : GO:0042995 - cell projection [Evidence IDA]; GO:0043025 - cell soma [Evidence IDA]; GO:0005887 - integral to plasma membrane [Evidence IEA] GO_function : GO:0005386 - carrier activity [Evidence IEA]; GO:0017153 - sodium:dicarboxylate symporter activity [Evidence IEA]; GO:0015293 - symporter activity [Evidence IEA] GO_process : GO:0006810 - transport [Evidence IEA] codon_start : 1 note : glial high affinity glutamate transporter; solute carrier family 1, member 3; glutamate/aspartate transporter product : solute carrier family 1 (glial high affinity glutamate transporter), member 3 protein_id : NP_683740.1

name	EG622770 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149266394 GeneID:622770 MGI:3644431
definition	codon_start : 1 product : hypothetical protein protein_id : XP_902399.3

name	LOC100039619 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149266398 GeneID:100039619
definition	codon_start : 1 product : similar to RAN binding protein 3-like protein_id : XP_001473257.1

name	Ranbp3l (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:37574124 GeneID:223332 MGI:2444654
definition	GO_process : GO:0046907 - intracellular transport [Evidence IEA] codon_start : 1 exception : unclassified translation discrepancy product : RAN binding protein 3-like protein_id : NP_932141.1

name	1110020G09Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94536713 GeneID:68646 MGI:1915896
definition	GO_component : GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0003951 - NAD+ kinase activity [Evidence IEA] GO_process : GO:0008152 - metabolism [Evidence IEA] codon_start : 1 product : hypothetical protein LOC68646 protein_id : NP_001035485.1

name	Skp2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7949135 GeneID:27401 MGI:1351663
definition	GO_component : GO:0000151 - ubiquitin ligase complex [Evidence TAS] GO_function : GO:0016301 - kinase activity [Evidence IEA] GO_process : GO:0000082 - G1/S transition of mitotic cell cycle [Evidence IDA]; GO:0008634 - negative regulation of survival gene product activity [Evidence IDA]; GO:0000074 - regulation of progression through cell cycle [Evidence IPI]; GO:0006512 - ubiquitin cycle [Evidence IEA]; GO:0006511 - ubiquitin-dependent protein catabolism [Evidence IDA] codon_start : 1 note : isoform a is encoded by transcript variant 1; p45 product : S-phase kinase-associated protein 2 isoform a protein_id : NP_038815.1

name	Skp2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:70909363 GeneID:27401 MGI:1351663
definition	GO_component : GO:0000151 - ubiquitin ligase complex [Evidence TAS] GO_function : GO:0016301 - kinase activity [Evidence IEA] GO_process : GO:0000082 - G1/S transition of mitotic cell cycle [Evidence IDA]; GO:0008634 - negative regulation of survival gene product activity [Evidence IDA]; GO:0000074 - regulation of progression through cell cycle [Evidence IPI]; GO:0006512 - ubiquitin cycle [Evidence IEA]; GO:0006511 - ubiquitin-dependent protein catabolism [Evidence IDA] codon_start : 1 note : isoform b is encoded by transcript variant 2; p45 product : S-phase kinase-associated protein 2 isoform b protein_id : NP_663443.1

name	Lmbrd2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31559855 GeneID:320506 MGI:2444173
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : LMBR1 domain containing 2 protein_id : NP_796152.2

name	Ugt3a1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46402181 CCDS:CCDS27374.1 GeneID:105887 MGI:2146055
definition	GO_function : GO:0016740 - transferase activity [Evidence IEA]; GO:0016757 - transferase activity, transferring glycosyl groups [Evidence IEA]; GO:0016758 - transferase activity, transferring hexosyl groups [Evidence IEA] GO_process : GO:0008152 - metabolism [Evidence IEA] codon_start : 1 exception : mismatches in translation note : UDP glucuronosyltransferase 3 family, polypeptide A1 product : UDP glycosyltransferases 3 family, polypeptide A1 protein_id : NP_997099.1

name	Ugt3a2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21450243 CCDS:CCDS27375.1 GeneID:223337 MGI:2145969
definition	GO_function : GO:0016740 - transferase activity [Evidence IEA]; GO:0016757 - transferase activity, transferring glycosyl groups [Evidence IEA]; GO:0016758 - transferase activity, transferring hexosyl groups [Evidence IEA] GO_process : GO:0008152 - metabolism [Evidence IEA] codon_start : 1 note : UDP glucuronosyltransferase 3 family, polypeptide A2 product : UDP glycosyltransferases 3 family, polypeptide A2 protein_id : NP_659094.1

name	Capsl (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110835711 GeneID:75568 MGI:1922818
definition	GO_function : GO:0005509 - calcium ion binding [Evidence IEA] codon_start : 1 note : Calcyphosine product : calcyphosine-like protein_id : NP_083617.2

name	Il7r (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:45269152 CCDS:CCDS27376.1 GeneID:16197 MGI:96562
definition	GO_component : GO:0009897 - external side of plasma membrane [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004896 - hematopoietin/interferon-class (D200-domain) cytokine receptor activity [Evidence IEA]; GO:0004907 - interleukin receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0007166 - cell surface receptor linked signal transduction [Evidence IEA]; GO:0048535 - lymph node development [Evidence IMP] codon_start : 1 note : IL-7 receptor alpha chain product : interleukin 7 receptor precursor protein_id : NP_032398.3

name	C230086A09Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:125991758 GeneID:320277 MGI:2443727
definition	GO_function : GO:0008289 - lipid binding [Evidence IEA] GO_process : GO:0006810 - transport [Evidence IEA] codon_start : 1 product : KPL2 protein protein_id : NP_796097.2

name	LOC666503 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666503
definition	number : 5 pseudo : _no_value

name	LOC666503 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666503
definition	number : 4 pseudo : _no_value

name	LOC666503 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666503
definition	number : 3 pseudo : _no_value

name	LOC666503 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666503
definition	number : 2 pseudo : _no_value

name	LOC666503 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666503
definition	number : 1 pseudo : _no_value

name	LOC383094 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:383094
definition	number : 1 pseudo : _no_value

name	LOC383094 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:383094
definition	number : 2 pseudo : _no_value

name	LOC383094 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:383094
definition	number : 3 pseudo : _no_value

name	LOC383094 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:383094
definition	number : 4 pseudo : _no_value

name	LOC383094 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:383094
definition	number : 5 pseudo : _no_value

name	LOC383094 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:383094
definition	number : 6 pseudo : _no_value

name	2410089E03Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149266388 GeneID:73692 MGI:1920942
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 42 ESTs product : RIKEN cDNA 2410089E03 gene transcript_id : XR_001570.2

name	LOC100039599 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149266395 GeneID:100039599
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 40 ESTs, 1 Protein product : hypothetical protein LOC100039599 pseudo : _no_value transcript_id : XR_031061.1

name	LOC268781 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149266401 GeneID:268781
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 3 Proteins product : similar to Myotubularin related protein 3 pseudo : _no_value transcript_id : XR_031101.1

name	LOC382969 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149266396 GeneID:382969
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 15 ESTs, 6 Proteins product : similar to uracil DNA glycosylase pseudo : _no_value transcript_id : XR_031075.1

name	LOC100039661 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149266403 GeneID:100039661
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 33 ESTs, 2 Proteins product : similar to UDP glycosyltransferases 3 family, polypeptide A1 pseudo : _no_value transcript_id : XR_031131.1

clone name	MSMg01-544F24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-460M20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-495K13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-138D17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-300L18
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-358A14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-178B06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-165D16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-355K08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-360M17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-494I20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-478L22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-518E06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-157H04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-263C07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-502A09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-315F12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-308A12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-169D04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-420F13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-475E20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-237E09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-474J12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-377P21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-132M18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-144E06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-332B10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-272A24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-101E21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-147K05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-185F09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-185G10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-484J07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-115G08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-372G02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-415M14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-325H13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-192O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-345N18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-484B22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-118J10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-164D08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-385K03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-264F20
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-370B05
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-335P19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-476E24
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-269E01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-461L03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-328L01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-470G06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-290A07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-382O17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-503F16
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-212G10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-417C12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-110F06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-386F19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-136E18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-399G23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-476O20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-083M21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-087K04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-447K10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-297G14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-212N05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-389P12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-445F11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-148E14
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-370A17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-374F17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-380B14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-165F01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-494G08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-305N18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-176A06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-178P05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-291B07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-150G01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-420B10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-136I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-547D10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-460E13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-277I01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-053G21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-440D21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-326D09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-053I03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-308M16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-353C04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-495L05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-232P08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-452H20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-524F23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-089F20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-328P23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-129O07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-066N01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-215H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143P08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-128C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305B06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-285E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107J13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274O06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085M19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-233G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-201K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-312I04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240L14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-138E10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-035P10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-078M22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212H16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-165O08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-263D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067M22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256B03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-223C06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319N01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234O07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-051E20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-080F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-233H10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-252J21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-214K21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-346I09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-090L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106D02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-137H19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-007I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-050P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139C05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158G20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-105H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123B01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-243G03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-109F20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-253P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025F21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-201M10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-196I23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-127N06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-217H01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-059K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092E10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-311J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158I07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-149E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091P06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-218B05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-036N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306G05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-304L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262H11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-244C16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-171K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-231K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119M08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139L19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-156I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-075A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138H23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-086I01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131M20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-026L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267N09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-264D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116D09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-146I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-014C20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-280L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097C12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-110J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132P08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-295M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051E16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051E24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166A15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-194L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150E17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-336K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206B02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-121L03
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-470G06.T7 (MSMg01no470_g06.b1)	MSMg01-470G06.TJ (MSMg01no470_g06.g1)
ACC	AG553404	AG553405
length	760	863
length of high quality (start - end)	215 (73 - 287)	---
definition	CHROMAT_FILE: MSMg01no470_g06.b1 PHD_FILE: MSMg01no470_g06.b1.phd.1 CHEM: term DYE: big TIME: Wed May 18 19:47:17 2005	CHROMAT_FILE: MSMg01no470_g06.g1 PHD_FILE: MSMg01no470_g06.g1.phd.1 CHEM: term DYE: big TIME: Wed May 18 19:47:17 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	CGGATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCCAGAGGATCC GCGGAATTCCACGTNCTGGCTCATGAGCTCCAAGATACCTGGATGACAGG CTCTCCCCAATGAAGACTTCATTGAGCGCTCTCACCGGCAGAAGCTGAGG CCCTGACGCCTCCGACCCTGCAGCAGAAAATGAGAGAGCCGTGAATTCCA GAACTATTAAAATAAAAAGTTCATAAAACTCTACAGCTTTAAAACCGTTG TGTTCTATAACTAACACAGTCATCCTGAATTGCTCAAAAGGTAAAACCTA AGTCTCCTGGCCTATATCAACATATCTTTCTTCTGTCCCTCCAAAGAAGC ACCATGAAGTTCCTCCTGGAACGCATTATAGAAGGTACAGACGACGCACA CCTTGTTCTTAGGTCACAATCACCTGCATGGTTCATGTTGGTGACCACTC CACCCAGATCTAGCTTTGTCCTAAGCTACCTCACACCGTCTTGCTAGCAC GGCTGTGCGAATTGACCTGACTCCGCATCCATGCAATAGCCCATTATGCC CCCAATCCTTCCCCGATACCCATACCCTCTCCCCGTTTCGCTCGCCACCT TACCCTCTCTTACTCCCCTCACCCTCCCTTTTCCCTCTTCCCCCCTCCTT CCCCCGCTTCCGTCCTCAACCCCCCTCTTATTCGTCACCTTGTTTCACCC ATTACCCCCCCTCTCTCTCGCCCCCCCTCCACTCCTCCCCTCCCTTTTAT CCCCCCCCCC	TCCCCATGTTTTGTTAGGCCTGGCGGCGCCTGCTTCCAACATGAGGTGAC CTATACAATTTCCCCGAAACTCAGTATGGACTCCGCAGAGCCTCTTTGAA GGTCTTCTTACAGTATTTACAACGTAAAAGACGATGGCTGTAATATCATA TATAATTACCTTTTTATTAAATAGTACCTGTGTGTGGTGTTTTGAACATG CTTGTTCTAGGATATGGCACTATTACGATGTGTGCTCCCCGCCGGTCTTG TTGTCTCCCCCTTCCGCATTCCGCGCGTTTTTTTTCTTTTGTCCTCCTTT CCCCTTTCTCTTCACTTTTTTTTTTTCCCTTCGCCTTTTCTCCCCTCCCT TAATCATCTTTTTCTCTCCTTTTCATTCTCCTCCCCTTCTTCCCCCCTTT CTCTTTACCTCAATTCCCTTTTCTTTCCCCCCCACCCCCCCTCTTCCTAC CCCTTCCTTTTTTTTTTCTCCTCCTTCCCTTCCCTATTTCTCCTTCCTCT TTTCCCTTTTCCTCTTCTTTCCCCCTCTCCTCCCCCTTTTCTCCCTCCCT CTCTTCTCCCTTATTATCCCTCTCTATCTTCTCCCCTCTTTTTTCCACCC TTTTCCTTTTCTTTTCCCAATCTTTCCCCTTTCTTTTCTCCCCTCTCCCC CCCTTTTCTTCCCCCTATCTTTTCTCTCCCTTTTTTCTCCTCCCTCCTAT CCCCTCTCTTTTGCCCCCTCTCTTTTCTTACCGCACCTCTCTATATCGTT CTCCCTTTCTTCTCTTTTTTCCGCCGCTCCTTTGTCTTCTTCCCTTTAAT CCCCTCTCTACCTTCCTATCCGCCTCCCCTAACTCCTCTTTTACCTCATT CCTACCATACCCC
quality values	Open. Hide. 8 10 8 7 8 13 15 8 8 8 17 14 34 30 17 15 14 17 17 29 24 25 22 18 21 32 34 46 28 24 22 17 17 10 11 10 9 9 9 9 6 6 8 14 19 15 14 14 13 16 12 30 30 28 23 23 29 34 34 23 22 16 23 3 0 3 9 9 9 9 9 9 19 20 37 36 36 36 23 27 20 16 16 16 29 34 37 37 46 48 33 36 36 38 31 33 22 21 21 28 43 43 43 40 48 42 42 34 42 37 42 47 43 43 39 39 32 32 26 15 15 21 32 36 28 37 44 57 57 57 54 54 54 48 48 57 48 47 47 43 43 47 57 57 57 57 57 57 57 57 59 59 57 40 41 41 41 41 47 46 57 43 39 43 43 43 43 43 43 43 32 32 35 35 37 35 33 28 28 25 28 24 12 14 14 21 32 43 38 43 21 21 14 24 24 38 43 50 43 35 35 32 32 17 20 27 32 32 35 32 32 32 43 32 32 29 28 29 43 43 50 50 42 36 28 23 32 32 42 47 47 32 30 14 14 12 21 12 19 15 20 24 32 43 42 59 43 47 57 59 57 44 44 32 39 39 37 32 30 37 37 46 43 43 43 46 31 32 22 22 22 32 30 40 26 29 22 17 17 19 32 37 40 34 28 19 20 17 24 26 28 21 13 13 13 22 21 21 17 12 12 12 12 11 11 11 23 23 21 14 15 15 32 32 43 39 30 24 12 10 8 8 8 6 6 7 6 8 8 15 23 19 28 25 19 15 10 12 13 21 22 17 17 17 25 30 12 10 8 8 8 10 10 11 11 15 12 18 18 23 24 28 15 15 14 19 21 11 11 10 10 9 9 9 10 8 15 12 12 10 10 9 11 11 11 11 11 12 12 12 12 11 10 10 9 10 10 17 11 11 11 23 23 19 9 9 9 9 19 19 14 14 15 22 12 12 11 9 8 8 8 8 8 15 17 18 13 13 10 10 10 11 11 10 15 13 13 16 16 13 13 10 10 10 10 8 8 8 8 8 8 8 8 8 8 9 10 19 17 10 10 8 8 8 10 10 13 10 10 10 10 10 10 11 10 10 13 13 10 11 11 11 11 11 11 11 11 11 11 12 19 19 21 18 18 12 12 12 19 12 12 12 15 19 12 9 9 10 10 9 10 11 11 11 12 12 11 9 8 8 8 8 8 8 8 8 6 6 8 8 10 10 10 10 9 12 9 9 9 11 19 9 8 8 8 8 13 9 11 18 18 12 10 8 8 6 6 8 11 11 14 12 10 9 9 10 10 10 12 10 10 9 9 9 10 13 15 10 10 10 10 10 9 9 9 9 10 12 12 15 14 8 6 6 8 6 8 8 10 8 8 8 8 8 8 8 9 9 10 8 9 9 9 9 10 9 9 9 9 9 9 6 8 6 6 8 8 10 9 9 9 9 9 12 12 11 10 10 10 10 11 15 19 17 19 12 14 8 13 10 12 10 13 17 10 10 9 10 8 8 8 8 8 8 10 10 8 9 9 10 15 28 25 14 12 11 8 10 8 8 8 8 10 10 10 10 10 10 18 14 9 9 9 9 9 9 12 12 19 12 11 9 9 9 9 14 17 17 7 7 6 6 8 8 10 15 15 10 10 10 10 9 9 18 19 17 19 17 14 8 8 8 8 10 8 9 12 15 12 13 13 11 11 8 8 7 7 6 6 8 6 8 8 8 8 8 13 17 16 16	Open. Hide. 8 10 10 7 7 11 8 8 8 8 8 10 10 10 10 8 8 8 20 23 33 37 28 17 13 13 10 14 14 22 16 9 9 9 10 9 10 8 9 8 9 8 8 10 10 17 25 19 14 13 16 23 22 29 13 17 9 12 12 15 9 8 8 9 8 8 12 6 6 6 6 8 8 8 12 15 15 16 20 20 32 28 30 21 12 12 11 11 11 12 15 19 18 20 23 34 27 27 14 11 11 14 10 11 11 23 25 37 19 15 10 9 9 12 11 11 11 11 11 11 11 11 11 11 17 12 14 12 20 11 11 16 17 18 21 10 10 10 10 10 10 11 13 13 14 16 13 8 8 8 15 22 15 16 16 23 16 19 28 28 28 30 30 33 32 28 22 19 12 12 12 13 12 12 13 21 25 28 26 15 12 9 9 9 10 11 8 10 6 6 8 8 13 16 8 8 6 6 10 10 26 15 14 14 14 23 19 24 14 12 11 8 8 8 11 8 8 10 12 12 21 21 16 10 13 10 10 10 19 22 20 15 10 9 9 10 9 9 8 8 8 10 8 9 9 9 10 13 9 8 8 8 9 8 8 9 10 10 12 15 9 9 9 9 8 8 8 8 8 8 8 10 10 11 11 8 8 8 8 8 8 10 9 12 9 13 15 14 8 8 8 8 8 10 23 21 21 10 6 6 8 8 8 9 13 8 8 9 9 9 9 9 9 9 9 16 10 15 18 18 25 34 24 16 12 10 9 9 9 9 6 6 6 6 8 8 8 10 11 13 23 24 21 9 9 9 8 10 8 8 8 8 8 10 9 9 9 9 10 10 8 12 8 8 8 6 8 8 8 8 8 8 8 8 8 8 8 10 11 8 8 8 11 12 9 9 8 12 11 11 12 8 9 8 8 8 8 8 10 10 16 13 19 10 12 7 7 8 10 10 8 6 7 6 8 8 15 10 10 11 9 9 9 8 8 8 8 8 10 19 18 8 6 6 6 10 10 11 8 10 8 8 8 8 8 10 8 8 9 9 12 10 8 8 8 8 8 8 10 13 8 8 11 21 16 10 10 10 8 10 6 7 10 12 10 15 15 26 11 13 9 10 11 8 8 8 9 10 10 8 8 10 10 10 8 8 6 6 8 8 8 8 10 12 9 11 10 15 13 14 11 12 10 8 8 8 10 11 12 17 19 22 12 10 9 9 9 10 10 9 10 10 11 11 9 8 8 13 9 11 12 12 10 10 10 19 14 11 11 13 10 10 11 11 9 8 8 8 8 11 10 8 8 6 6 6 7 7 8 14 8 8 8 8 8 8 8 8 8 16 16 15 13 10 10 11 17 19 16 13 10 8 9 10 10 9 9 11 13 13 10 10 10 11 10 10 10 10 10 10 10 12 13 15 15 20 22 8 8 8 8 11 15 15 9 9 12 12 18 16 16 9 9 9 9 11 8 8 8 11 10 15 8 9 8 8 8 8 9 15 15 20 20 18 21 11 8 8 8 8 8 10 11 12 11 8 6 6 6 6 11 11 10 10 10 8 15 16 21 21 28 24 25 22 19 19 16 12 9 10 10 10 11 11 10 10 10 9 11 9 11 11 15 12 12 10 7 7 10 10 10 8 8 8 13 10 8 8 8 8 8 8 15 18 23 11 11 9 8 8 8 6 6 6 7 8 8 8 8 10 11 8 8 8 8 9 9 9 9 10 8 7 8 8 15 13 17 14 10 8 8 19 8 10 9 10 14 15 13 8 8 8 8 8 8 8 8 8 9 10 15 10 8 8 8 8 10 15 9 9 13 13 20 16 13 11 7 6 6 6 12 10 10 9 13 17 15 15 8 6 6 8 6 9 14 10 9 9 6 13 8 8 8 10 13 13 10 7 8 8 8 8 9 14 10 16 11 11 11 12 12 11 12 19 13 10 10 10 10 8 8 12 8 11 9 9 9 8 8 8 6 6 6

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no470_g06.b1 MSMg01no470_g06.b1 CHROMAT_FILE:
MSMg01no470_g06.b1 PHD_FILE: MSMg01no470_g06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:47:17 2005
         (215 letters)



>mm_chr15_9025449_9026063
          Length = 615

 Score =  387 bits (200), Expect = e-112
 Identities = 209/212 (98%)
 Strand = Plus / Minus

                                                                       
Query: 4   agctccaagatacctggatgacaggctctccccaatgaagacttcattgagcgctctcac 63
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 agctccaaggtacctggatgacaggctctccccaatgaagacttcattgagcgctctcac 356

                                                                       
Query: 64  cggcagaagctgaggccctgacgcctccgaccctgcagcagaaaatgagagagccgtgaa 123
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 355 cggcagaagctgaggccctgacgcctccgaccctgcagcagaaagtgagagagccgtgaa 296

                                                                       
Query: 124 ttccagaactattaaaataaaaagttcataaaactctacagctttaaaaccgttgtgttc 183
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 295 ttccagaactattaaaataaaaagttcataaaacgctacagctttaaaaccgttgtgttc 236

                                           
Query: 184 tataactaacacagtcatcctgaattgctcaa 215
           ||||||||||||||||||||||||||||||||
Sbjct: 235 tataactaacacagtcatcctgaattgctcaa 204


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 215
Length of database: 615
Length adjustment: 9
Effective length of query: 206
Effective length of database: 606
Effective search space:   124836
Effective search space used:   124836
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information