Query= MSMg01no470_p24.b1 MSMg01no470_p24.b1 CHROMAT_FILE:
MSMg01no470_p24.b1 PHD_FILE: MSMg01no470_p24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:48:06 2005
(246 letters)
>mm_chr15_21368919_21369565
Length = 647
Score = 447 bits (231), Expect = e-130
Identities = 243/247 (98%), Gaps = 1/247 (0%)
Strand = Plus / Minus
Query: 1 ggaatataatggaagtagtttgatagacattaaaattatctgtgttctgatttttaaaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 ggaatataatggaagtagtttgatagacattaaaattatctgtgttctgatttttaaaga 388
Query: 61 ctatgatgacttgaattgagaaaaagcaagtttgttacctatttttgtttttcccataaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 ctatgatgacttgaattgagaaaaagcaagtttgttacctatttttgtttttcccataaa 328
Query: 121 actttctagaccagtaagtacatattgattatatacaacctctg-aaaatataataaaat 179
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 327 actttctagaccagtaagtacatattgattatatacaacctctgaaaaatataataaaat 268
Query: 180 gaatgatttatgtcccaagacccacttaaaccatgtccaaacattacaactgtacaacta 239
||| |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||
Sbjct: 267 gaaggatttatgtcccaagacccacttaaaccatgtccaaccattacaattgtacaacta 208
Query: 240 gtgtcct 246
|||||||
Sbjct: 207 gtgtcct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 246
Length of database: 647
Length adjustment: 9
Effective length of query: 237
Effective length of database: 638
Effective search space: 151206
Effective search space used: 151206
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no470_p24.g1 MSMg01no470_p24.g1 CHROMAT_FILE:
MSMg01no470_p24.g1 PHD_FILE: MSMg01no470_p24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:48:06 2005
(435 letters)
>mm_chr15_21253837_21254671
Length = 835
Score = 810 bits (419), Expect = 0.0
Identities = 431/435 (99%)
Strand = Plus / Plus
Query: 1 acgatgaaatttctaagaaaaacttacttaattttattgtggtaatagttagtttaaata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acgatgaaatttctaagaaaaacttacttaattttattgtggtaatagttagtttaaata 260
Query: 61 tttagaatatttaatgactttgtataaatacaattaaatggatttgagatttctatagat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttagaatatttaatgactttgtataaatacaattaaatggatttgagatttctatagat 320
Query: 121 gttttacattaatttggttcccatcaaattgattagatgcattttgaggaaaaggggcat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 321 gttttacattaatttggttcccatcaaattgattagatgcattttgaggaaaaagggcat 380
Query: 181 gaatcttataatttgcacgatagagatttaatcccttctaaaatagtttattttgaagat 240
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaatcttataatttgcatgatagagatttaatcccttctaaaatagtttattttgaagat 440
Query: 241 ggtggtacagtggtgggatctttggtctgctgtggactcttatgatgacatcataaaaga 300
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggtggtatagtggtgggatctttggtctgctgtggactcttatgatgacatcataaaaga 500
Query: 301 gccttttcacttcccagttaatttttttatcatgcagctccctttctaagcttataaggc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gccttttcacttcccagttaatttttttatcatgcagctccctttctaagcttataaggc 560
Query: 361 agactcagtgtgtctatttattaatttgttacagaaaagaaacagtgaaagaagaaaaat 420
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 561 agactcagtgtgtctatttattaatttgttacagaaaggaaacagtgaaagaagaaaaat 620
Query: 421 taaaacatgaaagaa 435
|||||||||||||||
Sbjct: 621 taaaacatgaaagaa 635
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 435
Length of database: 835
Length adjustment: 9
Effective length of query: 426
Effective length of database: 826
Effective search space: 351876
Effective search space used: 351876
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
