Query= MSMg01no471_e16.b1 MSMg01no471_e16.b1 CHROMAT_FILE:
MSMg01no471_e16.b1 PHD_FILE: MSMg01no471_e16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:48:30 2005
(685 letters)
>mm_chr15_87667593_87668677
Length = 1085
Score = 1288 bits (666), Expect = 0.0
Identities = 678/682 (99%)
Strand = Plus / Plus
Query: 4 ggaattctgttctttcggcatgacttggtcttttgttttctagaaaaatcaaagcaacta 63
||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctgttctctgggcatgacttggtcttttgttttctagaaaaatcaaagcaacta 263
Query: 64 tatcaactgcatgagaccctcaggagatcggacctataaatgtaccttcccaagagttgg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tatcaactgcatgagaccctcaggagatcggacctataaatgtaccttcccaagagttgg 323
Query: 124 atggtcctaatccccttacctgaaattccaggcacaagctccctccagccatctctcctg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 atggtcctaatccccttacctgaaattccaggcacaagctccctccagccatctctcctg 383
Query: 184 gagtgttagggtatacaggagatggaagacaccaatgatgcagttttcctgagtcatcac 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gagtgttagggtatacaggagatggaagacaccaatgatgcagttttcctgagtcatcac 443
Query: 244 ccattctggagtgtgactcttaggtgaagtcattaacttcaatgcccatgttcctggatg 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ccattctggagtgtgactcttaggtgaagtcattaacttcaatgcccatgttcctggatg 503
Query: 304 gaacgcctgactcacattcctccacatcactccaataaactcactgtttcacatgctgga 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gaacgcctgactcacattcctccacatcactccaataaactcactgtttcacatgctgga 563
Query: 364 cctggatggaatcatttacatagcatttttgttgttgttgttctctctggggtgaaacag 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 cctggatggaatcatttacatagcatttttgttgttgttgttctctctggggtgaaacag 623
Query: 424 actccccaggaaatgttaagcaacagatgtggtcaggcctctcatgaccagggcacttga 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 actccccaggaaatgttaagcaacagatgtggtcaggcctctcatgaccagggcacttga 683
Query: 484 gaaagacggatgcttcgggcgctggagggactgcttgtcaccagaacacatgggggaggg 543
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 684 gaaagacggatgcttcgggctctggagggactgcttgtcaccagaacacatgggggaggg 743
Query: 544 tttacagaggatcagctctgtgacactaatgaaggccaagtgattaggacaccatccatc 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 tttacagaggatcagctctgtgacactaatgaaggccaagtgattaggacaccatccatc 803
Query: 604 tcaatgtaacagtcattagagccacgattaccataaccgctataagcttgtgatttatgg 663
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 804 tcaatgtaacagtcattagagccacgattaccataaccgctataagctcgtgatttatgg 863
Query: 664 agattgtaatgattatttttgt 685
||||||||||||||||||||||
Sbjct: 864 agattgtaatgattatttttgt 885
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 685
Length of database: 1085
Length adjustment: 10
Effective length of query: 675
Effective length of database: 1075
Effective search space: 725625
Effective search space used: 725625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no471_e16.g1 MSMg01no471_e16.g1 CHROMAT_FILE:
MSMg01no471_e16.g1 PHD_FILE: MSMg01no471_e16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:48:30 2005
(568 letters)
>mm_chr15_87851815_87852782
Length = 968
Score = 723 bits (374), Expect = 0.0
Identities = 417/438 (95%), Gaps = 16/438 (3%)
Strand = Plus / Minus
Query: 1 ctagtacttttatagtgtgaatgtattatgatacaatcctggcccattaacatctcatat 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 428 ctagtacttttatagtgtgaatgtattatgatacaatcctggcccattaacatctcatgt 369
Query: 61 gaatttattcaacatgttatggatctagtcccctgtccttcccagacaggactccacctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 gaatttattcaacatgttatggatctagtcccctgtccttcccagacaggactccacctc 309
Query: 121 acatgcacagccgtggctttccaatttaaagaaatagctgaagctttggcctgtattcca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 acatgcacagccgtggctttccaatttaaagaaatagctgaagctttggcctgtattcca 249
Query: 181 gtagcacagttaccagaatgctcaaggatctgggttaaattcctagcaacacacacacac 240
|||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 248 gtagcacacttaccagaatgctcaaggatctgggttaaattcctagca------acacac 195
Query: 241 acacacacacacacacacacacacacacacagagagagagagagagag--agagagagag 298
||||||||||||||||||||||||| | | |||||||||||||||||| ||||||||||
Sbjct: 194 acacacacacacacacacacacacagagagagagagagagagagagagaaagagagagag 135
Query: 299 --agagagagagacagagacagagacagagagagacagagagagacagagagagac--ag 354
|||||||||||||||||||||||||||||||||| |||||||||||||||||| ||
Sbjct: 134 acagagagagagacagagacagagacagagagagac--agagagacagagagagacagag 77
Query: 355 agagacagagagacagagagacagagagacagagagacagagacagagacagagagacag 414
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 76 agagacagagagacagagagacagagagac--agagacagagacagagacagagagacag 19
Query: 415 agagagacctaataacac 432
||||||||||||||||||
Sbjct: 18 agagagacctaataacac 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 132
Number of extensions: 16
Number of successful extensions: 16
Number of sequences better than 10.0: 1
Number of HSP's gapped: 9
Number of HSP's successfully gapped: 1
Length of query: 568
Length of database: 968
Length adjustment: 10
Effective length of query: 558
Effective length of database: 958
Effective search space: 534564
Effective search space used: 534564
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
