MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-472D13
Chromosome	15 (Build37)
Map Location	36,281,318 - 36,281,556
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Vps13b, EG666183, Cox6c, Rgs22, Fbxo43, 1700074I03Rik, Polr2k, Spag1, Rnf19, LOC670773, EG268795
Downstream gene	EG545101, Ankrd46, 4631426E05Rik, Pabpc1, LOC626746, Ywhaz, Zfp706, LOC670911, LOC667492, LOC100041288, Grhl2
Link	Open Mouse BAC browser

Click to get alignment info.

name	Vps13b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666173 MGI:1916380
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 104 ESTs, 4 Proteins

name	EG666183 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666183 MGI:3644983
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST

name	Cox6c (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12864 MGI:104614
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rgs22 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:626596 MGI:3613651
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 2 Proteins

name	Fbxo43 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:78803 MGI:1926053
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1700074I03Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73530 MGI:1920780
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST

name	Polr2k (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17749 MGI:102725
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Spag1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:26942 MGI:1349387
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rnf19 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:30945 MGI:1353623
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC670773 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:670773
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins pseudo : _no_value

name	EG268795 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:268795 MGI:3643413
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 mRNAs, 1268 ESTs, 12 Proteins

name	EG545101 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:545101 MGI:3644846
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Ankrd46 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68839 MGI:1916089
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4631426E05Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66696 MGI:1913946
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pabpc1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18458 MGI:1349722
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC626746 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:626746
definition	note : small nuclear ribonucleoprotein polypeptide G pseudogene pseudo : _no_value

name	Ywhaz (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22631 MGI:109484
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Zfp706 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68036 MGI:1915286
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC670911 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:670911
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	LOC667492 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667492
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	LOC100041288 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041288
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	Grhl2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:252973 MGI:2182543
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Vps13b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149266473 GeneID:666173 MGI:1916380
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 104 ESTs, 4 Proteins product : vacuolar protein sorting 13B (yeast), transcript variant 5 transcript_id : XM_986525.2

name	EG666183 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94398453 GeneID:666183 MGI:3644983
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST product : predicted gene, EG666183 transcript_id : XM_986599.1

name	Cox6c (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:83816957 GeneID:12864 MGI:104614
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cytochrome c oxidase, subunit VIc transcript_id : NM_053071.2

name	Rgs22 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94398486 GeneID:626596 MGI:3613651
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 2 Proteins product : regulator of G-protein signalling 22 transcript_id : XM_891200.2

name	Fbxo43 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124486946 GeneID:78803 MGI:1926053
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : F-box protein 43 transcript_id : NM_001081253.1

name	1700074I03Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149266471 GeneID:73530 MGI:1920780
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST product : RIKEN cDNA 1700074I03 gene transcript_id : XM_001475704.1

name	Polr2k (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:86355513 GeneID:17749 MGI:102725
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : polymerase (RNA) II (DNA directed) polypeptide K transcript_id : NM_001039368.1

name	Polr2k (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:86355509 GeneID:17749 MGI:102725
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : polymerase (RNA) II (DNA directed) polypeptide K transcript_id : NM_023127.2

name	Spag1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142372504 GeneID:26942 MGI:1349387
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sperm associated antigen 1 transcript_id : NM_012031.2

name	Rnf19 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:134053884 GeneID:30945 MGI:1353623
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ring finger protein (C3HC4 type) 19 transcript_id : NM_013923.2

name	EG268795 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149266474 GeneID:268795 MGI:3643413
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 mRNAs, 1268 ESTs, 12 Proteins product : predicted gene, EG268795, transcript variant 2 transcript_id : XM_898600.3

name	EG545101 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94398491 GeneID:545101 MGI:3644846
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : predicted gene, EG545101 transcript_id : XM_622200.3

name	Ankrd46 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802446 GeneID:68839 MGI:1916089
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ankyrin repeat domain 46 transcript_id : NM_175134.3

name	4631426E05Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803288 GeneID:66696 MGI:1913946
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4631426E05 gene transcript_id : NM_025712.3

name	Pabpc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31560655 GeneID:18458 MGI:1349722
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : poly A binding protein, cytoplasmic 1 transcript_id : NM_008774.2

name	Ywhaz (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31981422 GeneID:22631 MGI:109484
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide transcript_id : NM_011740.2

name	Zfp706 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:34328458 GeneID:68036 MGI:1915286
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger protein 706 transcript_id : NM_026521.3

name	Grhl2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46849779 GeneID:252973 MGI:2182543
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : grainyhead-like 2 (Drosophila) transcript_id : NM_026496.3

name	Vps13b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94398442 GeneID:666173 MGI:1916380
definition	codon_start : 1 product : vacuolar protein sorting 13B isoform 5 protein_id : XP_991619.1

name	EG666183 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94398454 GeneID:666183 MGI:3644983
definition	codon_start : 1 product : hypothetical protein protein_id : XP_991693.1

name	Cox6c (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:16716343 CCDS:CCDS27424.1 GeneID:12864 MGI:104614
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005743 - mitochondrial inner membrane [Evidence IDA]; GO:0005739 - mitochondrion [Evidence IDA]; GO:0005751 - respiratory chain complex IV (sensu Eukaryota) [Evidence ISS] GO_function : GO:0004129 - cytochrome-c oxidase activity [Evidence ISS] GO_process : GO:0006118 - electron transport [Evidence ISS] [Evidence IEA] codon_start : 1 product : cytochrome c oxidase, subunit VIc protein_id : NP_444301.1

name	Rgs22 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94398487 GeneID:626596 MGI:3613651
definition	codon_start : 1 product : similar to Regulator of G-protein signalling 22 protein_id : XP_896293.2

name	Fbxo43 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124486947 GeneID:78803 MGI:1926053
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0007126 - meiosis [Evidence IEA]; GO:0006512 - ubiquitin cycle [Evidence IEA] codon_start : 1 note : XErp1 homolog; endogenous meiotic inhibitor 2; early mitotic inhibitor 2 product : F-box protein 43 protein_id : NP_001074722.1

name	1700074I03Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149266472 GeneID:73530 MGI:1920780
definition	codon_start : 1 product : hypothetical protein LOC73530 protein_id : XP_001475754.1

name	Polr2k (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:86355514 CCDS:CCDS27426.1 GeneID:17749 MGI:102725
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0003899 - DNA-directed RNA polymerase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016779 - nucleotidyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform a is encoded by transcript variant 1; ABC10-alpha; metallothionein-I activator product : polymerase (RNA) II (DNA directed) polypeptide K isoform a protein_id : NP_001034457.1

name	Polr2k (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:86355510 GeneID:17749 MGI:102725
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0003899 - DNA-directed RNA polymerase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016779 - nucleotidyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform b is encoded by transcript variant 2; ABC10-alpha; metallothionein-I activator product : polymerase (RNA) II (DNA directed) polypeptide K isoform b protein_id : NP_075616.2

name	Spag1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755616 GeneID:26942 MGI:1349387
definition	GO_function : GO:0005488 - binding [Evidence IEA]; GO:0005525 - GTP binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0007338 - fertilization (sensu Metazoa) [Evidence IEA] codon_start : 1 exception : mismatches in translation note : TPR-containing protein involved in spermatogenesis product : sperm associated antigen 1 protein_id : NP_036161.1

name	Rnf19 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7305437 CCDS:CCDS27427.1 GeneID:30945 MGI:1353623
definition	GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006512 - ubiquitin cycle [Evidence IEA] codon_start : 1 note : XY body protein; ubiquitin conjugating enzyme 7 interacting protein 2 product : ring finger protein (C3HC4 type) 19 protein_id : NP_038951.1

name	EG268795 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82956648 GeneID:268795 MGI:3643413
definition	codon_start : 1 product : hypothetical protein isoform 2 protein_id : XP_903693.1

name	EG545101 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:63674627 GeneID:545101 MGI:3644846
definition	codon_start : 1 product : hypothetical protein protein_id : XP_622200.1

name	Ankrd46 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29789417 CCDS:CCDS27429.1 GeneID:68839 MGI:1916089
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] codon_start : 1 product : ankyrin repeat domain 46 protein_id : NP_780343.1

name	4631426E05Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981209 CCDS:CCDS27430.1 GeneID:66696 MGI:1913946
definition	GO_function : GO:0035091 - phosphoinositide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0007242 - intracellular signaling cascade [Evidence IEA] codon_start : 1 product : hypothetical protein LOC66696 protein_id : NP_079988.3

name	Pabpc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31560656 CCDS:CCDS27431.1 GeneID:18458 MGI:1349722
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS] GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0008143 - poly(A) binding [Evidence ISS]; GO:0003723 - RNA binding [Evidence IEA] GO_process : GO:0016071 - mRNA metabolism [Evidence ISS] codon_start : 1 note : poly A binding protein 1 product : poly A binding protein, cytoplasmic 1 protein_id : NP_032800.2

name	Ywhaz (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6756041 CCDS:CCDS27432.1 GeneID:22631 MGI:109484
definition	GO_component : GO:0005739 - mitochondrion [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0004497 - monooxygenase activity [Evidence IEA]; GO:0019904 - protein domain specific binding [Evidence IDA] GO_process : GO:0006605 - protein targeting [Evidence IDA] codon_start : 1 product : tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide protein_id : NP_035870.1

name	Zfp706 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312658 GeneID:68036 MGI:1915286
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 product : zinc finger protein 706 protein_id : NP_080797.1

name	Grhl2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46810275 CCDS:CCDS27434.1 GeneID:252973 MGI:2182543
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence ISS] [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence ISS] GO_process : GO:0045449 - regulation of transcription [Evidence ISS]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : grainyhead like 2 product : transcription factor CP2-like 3 protein_id : NP_080772.2

name	LOC670773 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:670773
definition	number : 1 pseudo : _no_value

name	LOC670773 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:670773
definition	number : 2 pseudo : _no_value

name	LOC670773 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:670773
definition	number : 3 pseudo : _no_value

name	LOC670773 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:670773
definition	number : 4 pseudo : _no_value

name	LOC670911 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:670911
definition	number : 2 pseudo : _no_value

name	LOC670911 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:670911
definition	number : 1 pseudo : _no_value

name	LOC667492 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667492
definition	number : 5 pseudo : _no_value

name	LOC667492 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667492
definition	number : 4 pseudo : _no_value

name	LOC667492 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667492
definition	number : 3 pseudo : _no_value

name	LOC667492 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667492
definition	number : 2 pseudo : _no_value

name	LOC667492 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667492
definition	number : 1 pseudo : _no_value

name	LOC100041288 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041288
definition	number : 5 pseudo : _no_value

name	LOC100041288 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041288
definition	number : 4 pseudo : _no_value

name	LOC100041288 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041288
definition	number : 3 pseudo : _no_value

name	LOC100041288 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041288
definition	number : 2 pseudo : _no_value

name	LOC100041288 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041288
definition	number : 1 pseudo : _no_value

clone name	MSMg01-124P03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-413H19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-338P10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-280C04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-162E05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-357K23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-335A14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-193L17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-419D06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-488O17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-521B14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-411A24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-524P15
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-387P08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-059K01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-492D19
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-153E03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-136C10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-293G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-147D18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-293N18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-321E10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-260K17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-517P21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-109B19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-277C12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-490I14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-089B15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-340A10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-415B17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-339H05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-172G22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-063C15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-075I16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-080E06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-514D17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-503G05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-155A10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-421C19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-421D18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-531L09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-465N04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-507C20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-068K01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-354E12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-329B05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-403J17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-158H02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-518H07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-277E13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-466C14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-265C19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-450E05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-466J05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-118G04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-377B07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-516D19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-181J04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-213L17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-354G03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-442F11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-288J09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-474E01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-177O22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-472D13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-449I11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-539P24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-390F23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-390L06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-515N03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-429K17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-331M12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-466K17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-359A04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-120B20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-411E11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-366L19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-387P11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-507I03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-272O20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-209F07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-113G15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-383I23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-505B08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-373O24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-539G15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-120H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-235K15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-188H15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-388H15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-358E01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-516B21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-166E23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-358P22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-096B11
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-378E11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-472K06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-397I09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-180D03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-169O14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-141M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345P24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-129C16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-167M23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-097E20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-289P24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349H09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-018M21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-226N18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-135M14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-307E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133M09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-109M22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047M07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154J19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011N21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277F17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-069N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321O24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-302M02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-332E07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-050A06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338P16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250A24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-096P13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-111A21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326L14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-232H18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-268E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-191A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124K02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151E16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-231O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343J14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-248N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284C11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-308E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006D11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-020B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119I17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213D23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150E13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-339L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185P19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119M09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-205B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349P23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207M20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-312E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166N24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261J18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009P21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283L09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045K24
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-472D13.T7 (MSMg01no472_d13.b1)	MSMg01-472D13.TJ (MSMg01no472_d13.g1)
ACC	AG554806	AG554807
length	739	744
length of high quality (start - end)	582 (70 - 651)	241 (75 - 315)
definition	CHROMAT_FILE: MSMg01no472_d13.b1 PHD_FILE: MSMg01no472_d13.b1.phd.1 CHEM: term DYE: big TIME: Wed May 18 19:49:47 2005	CHROMAT_FILE: MSMg01no472_d13.g1 PHD_FILE: MSMg01no472_d13.g1.phd.1 CHEM: term DYE: big TIME: Wed May 18 19:49:47 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	NACTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC GGAATTCTTAAATTTCACAATAGGCATAATGCCTATCTAAGAGTAACAAT AGTAAATTTAAATTTTGTATAAATATACAAAATTTTATCCCAATGAAAAC CTTAAACCAACGTAAGAAATTATAACTTTAATTTTGTATCCAAGATAAAG ATTTCTATCAATGTAGGATTATGGCTATACAATATTTTGCTTAAGAGTAA ATTTAATAACCTATTCCTATTTGTCTATTTCTTTAATTTTATAATACTAC ATATCCACCTTTCTTTTCCACCCCTATCCTTCATCTAAGAAAGAAGGGAA GAGAAGAGGAAAGAAAAGGCAGAAATCCCAGAGTCTAAGCTCTCTAGTTT CCTCTCTGTCCAAAGCTAAAACATTGTAAAGTATCCCTTAAATGGCAACA TATCTATAATTCTTAAACAACCAGAACCATCCACCTCAACTTAAGGAACT GGGAAGACGCTCTTCTTTTGTTTGCTTCTAGCTGAATTGGGGCAAAGAAT TCCCTCTGGGGGCCCAGAGGGAAACAGGAAACTTGACCTTGTTAAAGGAA GGCTAGCCGGCATCTTTTGCCATCCAGTCTCTATGTGCTGAGAAAGTTCA TGGCTTAGCTGATGTCCTGACTATAACTGTCTGAAAGGCTGAAAGGTCAA GAAGTTCTGGAACTGTTCTGGAAACAAGGCCTTAAGGGA	ACGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXTACCAGAAGAAATCATATCACTAGAGGAATCCTTGTGGAT AAAGAACAGCATAATTATACTAACAAACAGGACTCCTTTCCCTGGGTTTA CAGAGGATTCAGAAAGGGCCAACTCCTTGTCTTCTGCTTTCCTACTGTGG TTTTGTCCTGTGTTTTCCATCCCCATTACTCTCCAACTCTACCCCACCTT TTGCCTATCCCACCCCACCCCCACACGAACCCCACCCCACTTCCACCACC ATCATCTGGGATTGNGTCATTTGCGNCTAAATTTATGAATGGCTAAGGAA AGTCTCAGCATTCATCCTGAGGTTGTTACATAATGGCTGTTAGAACTCGG AAGGGGATACAGCAGGAAGGGCTTAGGAACTGCCAAGACAATACTTTTGA GCATCTATGCCTTTCTTTCTAAAATTAGACATTAGAGAAAACTTCCTTCT TCCTAAAATGTCATAATAGCCAATTATACCAACTAGAGATCTGCTTGGCG CATAGGCAGGTCTGACGATGGTTCACTGGAAGTTGGTAATCTCGCCCTTG TTTCACATAACTGTATACTTCTTATATTTTACTGTGAAAGTTTTTTTTTT TTTTTATAAAGTATAGCATGCGACATTTGGAAACGAGTAGAGTGTTGCGT TCACAGTTATATTAACCTACGCTTTTAGACCCCATTCATGAAAA
quality values	Open. Hide. 0 3 7 7 10 9 6 6 8 8 9 18 30 19 14 14 14 12 18 11 13 13 11 11 21 23 33 24 16 22 16 15 7 10 10 12 12 11 11 11 11 11 9 9 14 16 19 25 39 39 39 24 21 19 20 29 29 29 29 9 9 9 9 12 8 9 8 8 8 8 18 21 39 40 41 48 48 50 50 57 57 57 59 59 59 59 59 59 59 59 59 59 59 57 53 53 54 54 50 53 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 57 57 57 57 57 57 57 68 68 68 68 68 68 50 50 50 57 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 57 57 57 57 57 50 50 50 50 50 50 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 68 68 62 62 62 62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 43 43 35 35 43 43 62 62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 68 68 62 62 68 68 68 68 68 68 68 62 62 62 62 62 62 62 62 62 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 57 57 59 59 57 57 59 59 59 57 54 54 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 44 44 43 43 43 57 59 57 57 57 57 57 57 57 57 48 48 48 59 48 48 48 48 46 46 46 47 47 59 30 26 24 25 30 30 43 59 47 47 48 48 48 33 33 33 33 33 33 59 59 47 43 41 35 35 43 44 43 37 31 41 31 31 25 24 24 37 37 44 47 48 48 48 59 59 59 57 57 57 57 57 48 48 48 43 43 37 37 36 37 37 37 43 39 39 35 31 28 37 37 37 35 31 31 37 32 37 37 37 37 41 41 39 39 28 24 24 28 28 34 28 28 19 26 15 24 26 39 30 37 28 32 32 37 34 34 24 25 34 31 25 31 24 24 28 28 26 16 12 12 10 15 10 11 10 17 17 15 15 13 18 14 29 25 30 24 12 10 8 8 8 11 19 26 17 17 17 25 25 25 30 23 12 12 14 17 17 16 18 18 16 18 23 22 14 12 13 12 16 16 18 22 30 41 32 32 31 29 30 22 22 18 18 22 22 22 24 29 26 30 13 8 6 6 6 6 9 9 13 9 12 15 12 12 12	Open. Hide. 6 6 6 7 10 11 11 9 9 22 17 25 30 30 25 30 30 37 36 22 19 9 9 9 9 11 31 41 27 23 9 6 6 9 8 9 9 9 9 7 6 12 10 15 11 15 23 26 27 12 11 12 25 28 39 25 18 9 9 9 9 6 6 6 6 6 8 6 7 7 10 13 13 10 10 19 22 37 41 53 53 38 57 57 57 57 42 42 37 40 50 50 59 59 59 59 47 47 42 47 50 68 68 68 54 50 50 50 50 53 50 54 54 54 54 54 54 44 44 36 36 25 32 43 48 57 57 57 50 50 50 68 57 57 57 57 59 59 57 54 54 48 59 59 68 68 68 68 68 68 68 68 68 57 36 42 23 23 19 27 32 43 50 57 57 57 50 48 48 48 57 57 57 57 57 59 59 59 59 59 68 68 68 59 59 59 59 59 59 59 68 68 68 68 59 59 59 59 68 68 68 68 68 68 57 57 57 59 59 59 59 68 68 68 68 68 68 68 68 68 68 59 59 57 57 57 57 57 57 57 57 53 53 50 48 48 57 59 59 59 59 59 47 41 28 13 10 10 13 10 10 11 17 17 39 59 59 23 26 9 9 9 23 30 59 59 59 43 43 43 43 43 43 43 43 48 48 57 48 54 43 43 43 43 43 43 43 57 48 48 57 47 50 50 50 50 50 57 57 57 50 50 50 50 50 50 59 27 27 11 10 9 7 3 0 3 6 6 6 9 27 27 12 12 3 0 3 9 9 10 19 19 37 37 41 41 47 48 48 46 46 43 44 44 44 36 36 31 27 24 21 12 11 11 15 12 12 12 15 15 23 23 14 14 14 24 28 32 39 24 23 11 11 18 18 23 20 32 32 48 48 42 42 42 42 37 37 28 28 24 30 14 14 14 32 32 37 37 27 23 23 32 32 20 20 20 20 32 32 15 15 12 15 12 13 19 20 18 21 27 27 28 24 32 22 20 18 18 24 27 31 28 28 14 14 14 19 24 35 35 35 42 42 43 43 43 44 42 34 30 14 14 14 27 28 42 44 37 30 30 36 32 32 37 39 37 39 36 31 24 24 24 24 25 25 21 14 14 14 18 19 21 28 14 14 14 18 28 32 43 43 47 43 39 37 32 32 23 23 25 36 34 43 37 33 28 28 17 12 8 8 8 8 11 9 9 9 9 9 10 10 9 9 9 13 15 10 8 8 8 9 9 12 12 12 15 11 11 11 16 16 17 25 21 23 19 8 8 10 10 8 8 8 8 8 11 12 12 13 15 13 13 13 13 10 10 12 12 15 15 10 10 8 8 8 8 10 10 8 8 8 8 10 9 8 8 11 11 8 8 8 10 8 8 8 8 11 9 9 9 9 10 10 11 8 8 6 6 8 8 9 9 13 10 11 7 7 8 6 10 16 10 10 8 8 8 10 12 11 12 10 10 10 13 13 14 15 15 11 9 9 10 10 10 16 22 32 33 37 19 19 15 11 13 10 10 10 8 8 8 10 10 8 13 11 11 11 12 11 11 10 10 10 10 10 10 13 11 11 11 10 10 10 11 13 9 8 8 8 8 8 6 8 6 6 8 8 8 8 8 8 8 8 8 6 6 8 8 8 8 8 10 8 8 8 8 8 8 10 12 11 11 11 15 12 8 8 8 8 10 8 8 8 8 8 8 11 9 9 9 9 10 10 10

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no472_d13.g1 MSMg01no472_d13.g1 CHROMAT_FILE:
MSMg01no472_d13.g1 PHD_FILE: MSMg01no472_d13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:49:47 2005
         (241 letters)



>mm_chr15_36281118_36281760
          Length = 643

 Score =  402 bits (208), Expect = e-117
 Identities = 231/242 (95%), Gaps = 8/242 (3%)
 Strand = Plus / Plus

                                                                       
Query: 1   atatcactagaggaatccttgtggataaagaacagcataattatactaacaaacaggact 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atatcactagaggaatccttgtggataaagaacagcataattatactaacaaacaggact 260

                                                                       
Query: 61  cctttccctgggtttacagaggattcagaaagggccaactccttgtcttctgctttccta 120
           ||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||
Sbjct: 261 cctttccctgggtttacagaggattcagaaagggccacctccttgtcttctgatttccta 320

                                                                       
Query: 121 ctgtggttttgtcctgtgttttccatccccattactctccaactctaccccacc----tt 176
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||    | 
Sbjct: 321 ctgtggttttgtcctgtgttttccatccccattactctccaactctaccccacccccat- 379

                                                                       
Query: 177 ttgcctatccc-accccacccccacacgaaccccaccccacttccaccaccatcatctgg 235
             ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 --gcctacccccaccccacccccacacgaaccccaccccacttccaccaccatcatctgg 437

             
Query: 236 ga 237
           ||
Sbjct: 438 ga 439


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 241
Length of database: 643
Length adjustment: 9
Effective length of query: 232
Effective length of database: 634
Effective search space:   147088
Effective search space used:   147088
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information