Query= MSMg01no473_n10.b1 MSMg01no473_n10.b1 CHROMAT_FILE:
MSMg01no473_n10.b1 PHD_FILE: MSMg01no473_n10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:52:05 2005
(249 letters)
>mm_chr15_90391918_90392566
Length = 649
Score = 422 bits (218), Expect = e-122
Identities = 245/258 (94%), Gaps = 9/258 (3%)
Strand = Plus / Minus
Query: 1 ggag-aatttttattcctccttccatggcaagcagttatctgactgcagtagtctggatt 59
|||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||
Sbjct: 584 ggagaaatttttattcctccttccctggcaagcagttatctgactgcagtagtctgggtt 525
Query: 60 ggcacgaacggtcttctacaacttgtagtacattgccccagtttctttgtgc---ttttt 116
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 524 ggcacgaacggtcttctacaacttgtagtacattgccccagtttctttgtgctttttttt 465
Query: 117 ttttcggggg-----ggggcgaggaggtgagcatacatattaatgagactggttccctca 171
|||||||||| |||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 464 ttttcggggggaggaggggcgaggaggtgagcatacatattaatgagaccggttccctca 405
Query: 172 gtgagtgcatctgtgagctgaagctgtgtggacagttagtgcatctgtgagctgaagtgt 231
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 404 gtgagtgcatctgtgagctgaagctgtgtggacagtgagtgcatctgtgagctgaagtgt 345
Query: 232 gtcaggacttcgcttcct 249
||||||||||||||||||
Sbjct: 344 gtcaggacttcgcttcct 327
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 649
Length adjustment: 9
Effective length of query: 240
Effective length of database: 640
Effective search space: 153600
Effective search space used: 153600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no473_n10.g1 MSMg01no473_n10.g1 CHROMAT_FILE:
MSMg01no473_n10.g1 PHD_FILE: MSMg01no473_n10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:52:05 2005
(246 letters)
>mm_chr15_90195956_90196596
Length = 641
Score = 437 bits (226), Expect = e-127
Identities = 239/246 (97%), Gaps = 5/246 (2%)
Strand = Plus / Plus
Query: 1 atgcttcatgctgtaaccactttcaaataccagggtgaagggaagccataagcctagagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atgcttcatgctgtaaccactttcaaataccagggtgaagggaagccataagcctagagt 260
Query: 61 agaatttattgatgttgggttttgttttttttttttttttccaaatagtcatggagtcaa 120
|||||||||||||||||||||||| |||| ||||||||||||||||||||||||||
Sbjct: 261 agaatttattgatgttgggttttg-----ttttgttttttccaaatagtcatggagtcaa 315
Query: 121 actccttcctaaatatttgtggtgttttggatggcttgcctcctagagtctctggcatca 180
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 316 actccttcctaaatatttgtggtgttttggatggcttgcctccaagagtctctggcatca 375
Query: 181 gaaagcatggttcctagttggttgctgtctgggaaggatgagagatgtggtttttggaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 gaaagcatggttcctagttggttgctgtctgggaaggatgagagatgtggtttttggaaa 435
Query: 241 cagtgt 246
||||||
Sbjct: 436 cagtgt 441
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 246
Length of database: 641
Length adjustment: 9
Effective length of query: 237
Effective length of database: 632
Effective search space: 149784
Effective search space used: 149784
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
