Query= MSMg01no473_p05.b1 MSMg01no473_p05.b1 CHROMAT_FILE:
MSMg01no473_p05.b1 PHD_FILE: MSMg01no473_p05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:52:14 2005
(501 letters)
>mm_chr15_89201642_89202542
Length = 901
Score = 915 bits (473), Expect = 0.0
Identities = 494/501 (98%)
Strand = Plus / Minus
Query: 1 tgaccggttctacagaacaggtggcccatgctagtcgcaactaccgcgtatactacagca 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 tgaccggttctacagaacaggtggcccatgctagtcgcaactaccgcgtatactacagcg 642
Query: 61 ctgggcctaaggatgaggaccaggactacattgtggaccactccattgccatctatctgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 ctgggcctaaggatgaggaccaggactacattgtggaccactccattgccatctatctgc 582
Query: 121 tcaaccctgatggtcttttcaccgattactatggtcgcagcaggtcagcagagcagatcg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 tcaaccctgatggtcttttcaccgattactatggtcgcagcaggtcagcagagcagatcg 522
Query: 181 tatatagtatacgtcggcacatagctgccttccacagtgtcttgccctgaactataccta 240
|| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 tagagagtatacgtcggcacatagctgccttccacagtgtcttgccctgaactataccta 462
Query: 241 ttgcctattccctgcctttaaatggatgtacttaatctgtgcatgtgctctgtaccagca 300
||||||| ||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 ttgcctaggccctgtcattaaatggatgtacttaatctgtgcatgtgctctgtaccagca 402
Query: 301 gctcatttaaatagtctgtccggtgaacaggtggggtagcaacactttattaggctaggc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 gctcatttaaatagtctgtccggtgaacaggtggggtagcaacactttattaggctaggc 342
Query: 361 cagccaggaggcagcactggagtgaatggccccatagcacattaggggcaaagacctcca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 cagccaggaggcagcactggagtgaatggccccatagcacattaggggcaaagacctcca 282
Query: 421 ggtatatactactttccacccctgcctcagtgctgtccactcaaggctgggccatggatg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 ggtatatactactttccacccctgcctcagtgctgtccactcaaggctgggccatggatg 222
Query: 481 gtgcagcataggtctggaagc 501
|||||||||||||||||||||
Sbjct: 221 gtgcagcataggtctggaagc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 501
Length of database: 901
Length adjustment: 10
Effective length of query: 491
Effective length of database: 891
Effective search space: 437481
Effective search space used: 437481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no473_p05.g1 MSMg01no473_p05.g1 CHROMAT_FILE:
MSMg01no473_p05.g1 PHD_FILE: MSMg01no473_p05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:52:14 2005
(470 letters)
>mm_chr15_89023867_89024736
Length = 870
Score = 708 bits (366), Expect = 0.0
Identities = 434/470 (92%), Gaps = 24/470 (5%)
Strand = Plus / Plus
Query: 1 caagggctggcgagatggctcagcgggtaagagcactgactgttcttccgatggtcctga 60
|||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 225 caagggctggcgagatggctcagcaggtaagagcactgactgctcttccgatggtcctga 284
Query: 61 gttcaaatgccagcaaacacatggtggctcacaaccacccgtaattagatctgacgccct 120
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 gttcaaatcccagcaaacacatggtggctcacaaccacccgtaattagatctgacgccct 344
Query: 121 cttctggtgtgttcttaaaacagctacagtatacttatgtataataataaataattatct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 cttctggtgtgttcttaaaacagctacagtatacttatgtataataataaataattatct 404
Query: 181 gagctgggcgtggtggtgcacgcctttgatcccagcacttgggaggcagatttctgagtt 240
|||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 405 gagctgggcgtggtggcgcacgcctttgatcctagcacttgggaggcagatttctgagtt 464
Query: 241 caaggccagttctggtccacaaagtgagttccaggacagccagggctatatagagaaacc 300
||||||||| ||||||| ||||||||||||||||||||||||||||||||| |||||||
Sbjct: 465 caaggccagc-ctggtcctcaaagtgagttccaggacagccagggctatataaagaaacc 523
Query: 301 ctgtctcgaaaaaacaacaacaaaaaaacaacaacaacaacaaaaaacaaaaaacaaaac 360
|||||||||||||||||||| |||||||| |||||||||||
Sbjct: 524 ctgtctcgaaaaaacaacaa---aaaaacaa------------------aaaaacaaaac 562
Query: 361 aaaacaaaaaacccagcccaggggcatagctagtacttacctaacctgcacaaaacccta 420
|||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||||
Sbjct: 563 aaaa--aaaaacccagcctgggggcatagctagtatttacctaacctgcacaaaacccta 620
Query: 421 agtcccacccccagcaccccataggctcaggtgtggtggcacacacctgt 470
|||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 621 agtcccacccccagcaccccataggctcaggtgtggtggcacacgcctgt 670
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 470
Length of database: 870
Length adjustment: 10
Effective length of query: 460
Effective length of database: 860
Effective search space: 395600
Effective search space used: 395600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
