Query= MSMg01no474_e01.b1 MSMg01no474_e01.b1 CHROMAT_FILE:
MSMg01no474_e01.b1 PHD_FILE: MSMg01no474_e01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:52:38 2005
(271 letters)
>mm_chr15_36423112_36423782
Length = 671
Score = 460 bits (238), Expect = e-134
Identities = 260/270 (96%), Gaps = 6/270 (2%)
Strand = Plus / Minus
Query: 5 gaattctttct---gtttcctcccatctatgtcccggactatgattgaccgtgggttgtt 61
||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||||
Sbjct: 488 gaattctttctgcagtt---tcccatctatgtcccggactatgattgactgtgggttgtt 432
Query: 62 gaaagcaacaaaagtaaagccatgaataagggctctgtgtagtaagagcagtcatgttcg 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 gaaagcaacaaaagtaaagccatgaataagggctctgtgtagtaagagcagtcatgttcg 372
Query: 122 agaaaacgatgtgctgactactgaaagcagatgtgggggtacgtggcacacgaagcagaa 181
||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 371 agaaaacgatgtgctgactactgaaagcacatgtgggggtaggtggcacacgaagcagaa 312
Query: 182 gttgggtttagtcatagttgagatgcctgctcagatacatcaggagagactaggattcaa 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 gttgggtttagtcatagttgagatgcctgctcagatacatcaggagagactaggattcaa 252
Query: 242 gacagaggaagtcatcaggaagatggggca 271
|||||||||||| |||||||||||||||||
Sbjct: 251 gacagaggaagttatcaggaagatggggca 222
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 271
Length of database: 671
Length adjustment: 9
Effective length of query: 262
Effective length of database: 662
Effective search space: 173444
Effective search space used: 173444
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no474_e01.g1 MSMg01no474_e01.g1 CHROMAT_FILE:
MSMg01no474_e01.g1 PHD_FILE: MSMg01no474_e01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:52:38 2005
(533 letters)
>mm_chr15_36245043_36245974
Length = 932
Score = 948 bits (490), Expect = 0.0
Identities = 523/534 (97%), Gaps = 3/534 (0%)
Strand = Plus / Plus
Query: 1 aattctttgttcagctctgagccccatttttaaatggggttatttgattttctggagtcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aattctttgttcagctctgagccccatttttaaatggggttatttgattttctggagtcc 260
Query: 61 accacagcccaaacccatctgcttagagatggcaacatccccaagtggctggtccttcct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 accacagcccaaacccatctgcttagagatggcaacatccccaagtggctggtccttcct 320
Query: 121 acatcacttttagtaaatatcttatagacatggccacaaggccaagctggtcaaggtagt 180
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 321 acatcacttttagtaaatatcttatagacatggccacaaggccaatctggtcaaggtagt 380
Query: 181 cctcctagacctcctagacagtcagaggtgtgggtctccacttaaggatcaaagacactg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cctcctagacctcctagacagtcagaggtgtgggtctccacttaaggatcaaagacactg 440
Query: 241 tagtatgtat-tctgcctatggtctgggggctgggggcaatgcatctattcaagaaaaaa 299
||||||| || |||||||||||||||||||| |||| |||||||||||||||||||||||
Sbjct: 441 tagtatg-atgtctgcctatggtctgggggcaggggacaatgcatctattcaagaaaaaa 499
Query: 300 aatcgagttttgacattctgagggctttcttctacttactgttccacttggggtcctggc 359
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 a-tcgagttttgacattctgagggctttcttctacttactgttccacttggggtcctggc 558
Query: 360 ctactgaatagggacctgaacctacgctcaggttggtttgctcccttggcccacccgcca 419
||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||
Sbjct: 559 ctactgaatagggacctgaacctacgctcaggtcggtttgctccctcagcccacccgcca 618
Query: 420 catgctggttgtctctagaaacaccctcacagacacattttggaagcgttcctgactacc 479
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 catgccggttgtctctagaaacaccctcacagacacattttggaagcgttcctgactacc 678
Query: 480 ttgctgggtgtctttcaatccaaccgcttgctcttctgagcctgtcctctgtcc 533
|||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 679 ttgctgggtgtctttcaatccaaccgcttgctcttccgagcctgtcctctgtcc 732
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 533
Length of database: 932
Length adjustment: 10
Effective length of query: 523
Effective length of database: 922
Effective search space: 482206
Effective search space used: 482206
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
