Query= MSMg01no475_e20.b1 MSMg01no475_e20.b1 CHROMAT_FILE:
MSMg01no475_e20.b1 PHD_FILE: MSMg01no475_e20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:54:02 2005
(479 letters)
>mm_chr15_8586581_8587460
Length = 880
Score = 799 bits (413), Expect = 0.0
Identities = 464/481 (96%), Gaps = 3/481 (0%)
Strand = Plus / Minus
Query: 1 taagacaggggctggagagatggctcagcagttaagagcacttccagaggtcctgagttc 60
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 861 taagagaggggctggagagatggctcagcagttaagagcacttccagaggtcctgagttc 802
Query: 61 aattctcagcaaccacgtggtggctcacaaccatctgtaattggatctgatgccctcttc 120
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 801 aattctcagcaaccacgtggtggctcacaaccatctgtaattggatctgaagccctcttc 742
Query: 121 tggtgtgtcagaaatagcatgctcatatacatacataaataaat-ctttttttaaaaaat 179
|||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct: 741 tggtgtgtcagaaatagcatgctcatatacatacataaataaatccttttttt-aaaaag 683
Query: 180 attaaaaggaacaaatgagcccatagtattagtataaaaatagtttttatcccaggacac 239
| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
Sbjct: 682 agtaaaaggaacaaatgagcccatagtattagtataaaaatagtttttatcccagcacgc 623
Query: 240 ttctcctatgt-actctgtcccatgctttgagaactgttagtacaatggaaggtaaatga 298
|||||| | | |||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 622 ttctccaaggagactctgtcccatgctttgagaactgttagtacaatggaaggtgaatga 563
Query: 299 aagaaagagaaaatgttaaataaattcaggaaagaggactggggaaatgactcatttggt 358
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 562 aagaaagagaaaatgttaaataaactcaggaaagaggactggggaaatgactcatttggt 503
Query: 359 atgattgcttgatgtgtgcatgagagcttgagttccagcctcggaacagtgcccatgtaa 418
||| |||| ||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 502 atggttgcatgatgtgtgcatgagggcttgagttccagcctcggaacagtgcccatgtaa 443
Query: 419 aaagagcagagcacaatgtcacacacctataaatctccaacattggcactggaaaggcag 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 aaagagcagagcacaatgtcacacacctataaatctccaacattggcactggaaaggcag 383
Query: 479 a 479
|
Sbjct: 382 a 382
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 479
Length of database: 880
Length adjustment: 10
Effective length of query: 469
Effective length of database: 870
Effective search space: 408030
Effective search space used: 408030
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no475_e20.g1 MSMg01no475_e20.g1 CHROMAT_FILE:
MSMg01no475_e20.g1 PHD_FILE: MSMg01no475_e20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:54:02 2005
(242 letters)
>mm_chr15_8411151_8411790
Length = 640
Score = 449 bits (232), Expect = e-131
Identities = 239/242 (98%), Gaps = 2/242 (0%)
Strand = Plus / Plus
Query: 1 cactacgaagggaccatatatctagcttgtcatcacctaacagagtatgtttgataaatt 60
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cactacgaagggaccatat--ctagcttgtcatcacctaacagagtatgtttgataaatt 258
Query: 61 cagaatgactaccccaattaaagaacataaaagaatctcaattctcacattgcattcaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 cagaatgactaccccaattaaagaacataaaagaatctcaattctcacattgcattcaaa 318
Query: 121 gtaaattaggaagtccaaagttttcaaatggaaaacacaacaactcacttgaaactgtgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 gtaaattaggaagtccaaagttttcaaatggaaaacacaacaactcacttgaaactgtgt 378
Query: 181 tattttgggcaaattgatattaccacagacccacgtgggaacattcccagctttaaaaaa 240
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 379 tattttgggcaaattgatattaccacagacccacgtgggatcattcccagctttaaaaaa 438
Query: 241 aa 242
||
Sbjct: 439 aa 440
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 242
Length of database: 640
Length adjustment: 9
Effective length of query: 233
Effective length of database: 631
Effective search space: 147023
Effective search space used: 147023
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
