XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTACAGATACGCGCAATTCA
CAGAATATTGACATCTNTNANAATGGNTGTGATTNTTTNTAAATNTAATT
TTTTAAAAAAAAAAGGGGGGGGGGGGGGGCAAAAAAAAAAAATTTNTTCC
CCCCCCCCCCCCCAAACAAAAACATCNATCCTCGTCTATCTTTGCCTTTT
CCTTCTCCCTTTTCCTCTCTGATCGCGCCGGCCGCCCCACCCTATTAATT
TTAAAAATAAAACCCCCCTCCTCCTCTATTCGTCATTAAAAATTAACCCC
TCTCCTACACCTCTTTTCTTGCCCCTTGTGAGGGGGCCCCGGCCTCCTTT
CCTCACAAACAAACAAAAACCCCCTGTCCTCTCCACCCCCAACACCAAAT
AGAAAAAATATAACTCCCTCCCCCCACACCAAAAATAAAACATTTTCCTC
TATTTTCTTTTTTGTGTCGTCGGTTTATCCTCCCCTAATTTTTCATACAA
TACTATTATCAATCCCCCCTCTCTCAACCCCCCCCCTCAACCTTCATTCT
CTCCTTTCTTGGCTTTCATAAGAACATATCACCTCCACCAACACTCCTCT
CCCCCCCCTCCTTTTTTTTCTTTCTCTGTAATTGTCCACACCACCTCCTT
TCCCCCCCCCCCTTTCTGTTCTCATCCACACTCCTATTCTCTTATGTTTC
CTCTTCCGTCCTCCCCGGGTTCTCCCCCCTTTTTTTTTCCCCCGCCCCCA
TCNCCTATATAACCTCACAATTTTATTATATTCTCCCACCCACCCACCTC
AGCTAATTCCGTTACAATCTCCTCCTTATTACCCACATTCCCCACCATCC
CCCCCCCCCCCTTCTTTATCCTTTCTCCCCCTTTTTCTTCTCTACCCTCA
TTCCCTCC

NNNCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXTTACACGAGAAAGTCTAGAGTATGGTAAATATGAA
AAAAGATTTATGCGACTAATGTTTATTTATGATTATGCACCATAGATATA
AACTTGGTCATAAACTTCTGAGAAACACAGAGAACCAGCATGTTAGAGGT
CCACTGACTTCTCCATACATATTCTACAAATATCTTTCAAAAATTCTGTG
AAGTATCATGAAAAAAAGGAGGTATTTTTGTTAATTTACTAGGACTGTTA
TTTATACAAGCCATTTCATTAATTTTATTTCATTAAGATATATATTAGGA
ATACATCTTCAGAATAATGACTTAGAATCAAAGGTAGAGGCTAATGACAA
GAAGGATATATAGTGCTAATTATCTAATAAATGGTGCCAGTGAAAAAGCA
GCATACTCTTTAGTCATCACTTCCTTACTGTCCATTCACAGCACACATCT
TTTCAATTGACTTTCAATGCCTCTCTCAAGATTGTTACAATAACAAAAGT
TACCTTAAATGCTAAGGTAATTCTGTCATTTTAGTGTTAGGATTCCCCCT
TCTTCACCAACCAGGCAGCATACACTAGCAGGTCTGAGCCCCCACAGCCA
ACATATATACAGCAGAGAAGTACCTGGTATGGCTTCAGTGAGAAAAGTGG
CGCCTAACCCTCAAAAGACTTGAGGCCCTAGGGAGTGGGAAGG

Query= MSMg01no477_b10.g1 MSMg01no477_b10.g1 CHROMAT_FILE:
MSMg01no477_b10.g1 PHD_FILE: MSMg01no477_b10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:56:25 2005
         (664 letters)



>mm_chr15_49394458_49395521
          Length = 1064

 Score = 1222 bits (632), Expect = 0.0
 Identities = 656/664 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctagagtatggtaaatatgaaaaaagatttatgcgactaatgtttatttatgattatgca 60
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctagagtatggtaaatatgaaataagatttatgcgactaatgtttatttatgattatgca 260

                                                                       
Query: 61  ccatagatataaacttggtcataaacttctgagaaacacagagaaccagcatgttagagg 120
           |||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||
Sbjct: 261 ccatagatataaacttggccataaatttctgagaaacacagagaaccagcatgttagagg 320

                                                                       
Query: 121 tccactgacttctccatacatattctacaaatatctttcaaaaattctgtgaagtatcat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 321 tccactgacttctccatacatattctacaaatatctttcaaaaattctgtgaagtatcag 380

                                                                       
Query: 181 gaaaaaaaggaggtatttttgttaatttactaggactgttatttatacaagccatttcat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaaaaaaaggaggtatttttgttaatttactaggactgttatttatacaagccatttcat 440

                                                                       
Query: 241 taattttatttcattaagatatatattaggaatacatcttcagaataatgacttagaatc 300
           |||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 taaacttatttcattaagatatatattaggaatacatcttcagaataatgacttagaatc 500

                                                                       
Query: 301 aaaggtagaggctaatgacaagaaggatatatagtgctaattatctaataaatggtgcca 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaaggtagaggctaatgacaagaaggatatatagtgctaattatctaataaatggtgcca 560

                                                                       
Query: 361 gtgaaaaagcagcatactctttagtcatcacttccttactgtccattcacagcacacatc 420
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gtgaaaaagcagcgtactctttagtcatcacttccttactgtccattcacagcacacatc 620

                                                                       
Query: 421 ttttcaattgactttcaatgcctctctcaagattgttacaataacaaaagttaccttaaa 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttttcaattgactttcaatgcctctctcaagattgttacaataacaaaagttaccttaaa 680

                                                                       
Query: 481 tgctaaggtaattctgtcattttagtgttaggattcccccttcttcaccaaccaggcagc 540
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 681 tgctaaggtaattctgtcattttagtgttaggatccccccttcttcaccaaccaggcagc 740

                                                                       
Query: 541 atacactagcaggtctgagcccccacagccaacatatatacagcagagaagtacctggta 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 atacactagcaggtctgagcccccacagccaacatatatacagcagagaagtacctggta 800

                                                                       
Query: 601 tggcttcagtgagaaaagtggcgcctaaccctcaaaagacttgaggccctagggagtggg 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 tggcttcagtgagaaaagtggcgcctaaccctcaaaagacttgaggccctagggagtggg 860

               
Query: 661 aagg 664
           ||||
Sbjct: 861 aagg 864


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 664
Length of database: 1064
Length adjustment: 10
Effective length of query: 654
Effective length of database: 1054
Effective search space:   689316
Effective search space used:   689316
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)