Query= MSMg01no477_b14.b1 MSMg01no477_b14.b1 CHROMAT_FILE:
MSMg01no477_b14.b1 PHD_FILE: MSMg01no477_b14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:56:26 2005
(702 letters)
>mm_chr15_71365908_71367012
Length = 1105
Score = 1228 bits (635), Expect = 0.0
Identities = 676/691 (97%), Gaps = 3/691 (0%)
Strand = Plus / Plus
Query: 14 gaattcagtgacattacacacgactttaaggataaatgtcccccaacttagatgagattg 73
||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||
Sbjct: 214 gaattcagtgacattacacacgactttaaggataaatctcccccgacttagatgagattg 273
Query: 74 gcaaactagattatagaatactacttcatcattgaagatcccaaattcccacaacaccct 133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 gcaaactagattatagaatactacttcatcattgaagatcccaaattcccacaacaccct 333
Query: 134 ctatatcccaagacagaaatttagcaggctgcatgggactctttgtgttatcttccatca 193
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 334 ctatatcccaagacagaaatttagcaggctgcatgggactctttgtgttatcttccacca 393
Query: 194 tcactcaacaagg---tattgtatattcatttacaagggaaggtacactgtcacaggaca 250
||||||||||||| |||||||| |||||||||||||||| ||||||||||||||||||
Sbjct: 394 tcactcaacaaggtattattgtatgttcatttacaagggaatgtacactgtcacaggaca 453
Query: 251 ttctccctggtggtgaacaccatcaagactatacctatgtagccccattgggattttctc 310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 ttctccctggtggtgaacaccatcaagactatacctatgtagccccattgggattttctc 513
Query: 311 tcctccaacgatgacagtctatgtgtagataccccaaccttcttgctcatcttgaaatca 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 tcctccaacgatgacagtctatgtgtagataccccaaccttcttgctcatcttgaaatca 573
Query: 371 tgaagggaaaaccaattctcttctcagcaaaggtgctttctaaaatagttcatccttgat 430
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 574 tgaagggaaaaccaattctcttctcagcaagggtgctttctaaaatagttcatccttgat 633
Query: 431 cctctgctctttttgtgtctgtttccatataagactggagggatccattcacatcatcta 490
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 cctctgctctttttgtgtttgtttccatataagactggagggatccattcacatcatcta 693
Query: 491 tgcctcttcttactatcataaccgggcacacaaaacacagaattgggaaaagtatatggt 550
||| ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||
Sbjct: 694 tgcatcttcttactatcatgaccaggcacacaaaacacagaattgggaaaagtatatggt 753
Query: 551 ctatatcattcagagacgtaatgcacagtggcctgatctggtgacaaaggtctataatcc 610
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 754 ctatatcattcagagacgtaatgcacagtggcctgatctggtgacaaaggtctataatcc 813
Query: 611 cagctactcaggatgcagaagcaggataattgtatgtcttgcctgagctacaggtagtac 670
||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 814 cagctactcaggaggcagaagcaggataattgtacgtcttgcctgagctacaggtagtac 873
Query: 671 aagatcagtctgggtaacttggttaacttgt 701
|||||||||||||||||||||||||||||||
Sbjct: 874 aagatcagtctgggtaacttggttaacttgt 904
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 702
Length of database: 1105
Length adjustment: 10
Effective length of query: 692
Effective length of database: 1095
Effective search space: 757740
Effective search space used: 757740
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no477_b14.g1 MSMg01no477_b14.g1 CHROMAT_FILE:
MSMg01no477_b14.g1 PHD_FILE: MSMg01no477_b14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:56:26 2005
(656 letters)
>mm_chr15_71549849_71550904
Length = 1056
Score = 1237 bits (640), Expect = 0.0
Identities = 652/656 (99%)
Strand = Plus / Minus
Query: 1 cataagttaaaacatgggcatgattttggaagagatgacagaaccatgagtggagatgga 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 856 cataagttaaaacatgggcatgattttggaagagatgacagaaccaagagtggagatgga 797
Query: 61 caagagagagtactgtagaagtcagtgttacatacatttgtgaaaagtcataaacttgca 120
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 796 caagagagactactgtagaagtcagtgttacatacatttgtgaaaagtcataaacttgca 737
Query: 121 aatttctaaaattaatatatgacaatgaagtttgtaattattatttttttaaatcccagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 aatttctaaaattaatatatgacaatgaagtttgtaattattatttttttaaatcccagt 677
Query: 181 cttctaagcctataggtttctgtctcttcccttacagagtgaaaaatcgaatgtaaattt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 cttctaagcctataggtttctgtctcttcccttacagagtgaaaaatcgaatgtaaattt 617
Query: 241 tcctcttatgtaagtttccttttgtcttagagactttgcatatcatgattaaaccactgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 tcctcttatgtaagtttccttttgtcttagagactttgcatatcatgattaaaccactgg 557
Query: 301 cagggtcacactgtctctccagtccctgtagctcatttcttccctcacccaagccctttc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 cagggtcacactgtctctccagtccctgtagctcatttcttccctcacccaagccctttc 497
Query: 361 tttatagagctctctctggaagcttctccatgtttctgggcataggagttactttaacta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 tttatagagctctctctggaagcttctccatgtttctgggcataggagttactttaacta 437
Query: 421 tagtgttcatggaagttttgcctgtattacagatgtattaaattattttctaaatgactc 480
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 436 tagtgttcatggaagttttgcctgtattacagacgtattaaattattttctaaatgactc 377
Query: 481 tccattacaagttgacaagaataaaggtgcctggactttgctgtgattatagctgcatca 540
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 376 tccattacaagttgacaagactaaaggtgcctggactttgctgtgattatagctgcatca 317
Query: 541 aacactcaggaacatacaataaatataaaacatataggtaattaataccagaaatctcta 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 aacactcaggaacatacaataaatataaaacatataggtaattaataccagaaatctcta 257
Query: 601 gtaataaaatgctgctttttattttcagtttaaaagtcagtaaccacagctccact 656
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 gtaataaaatgctgctttttattttcagtttaaaagtcagtaaccacagctccact 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 656
Length of database: 1056
Length adjustment: 10
Effective length of query: 646
Effective length of database: 1046
Effective search space: 675716
Effective search space used: 675716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
