Query= MSMg01no478_f24.b1 MSMg01no478_f24.b1 CHROMAT_FILE:
MSMg01no478_f24.b1 PHD_FILE: MSMg01no478_f24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:58:05 2005
(670 letters)
>mm_chr15_23319675_23320744
Length = 1070
Score = 1195 bits (618), Expect = 0.0
Identities = 654/666 (98%)
Strand = Plus / Plus
Query: 5 gaattctcatctccacagaagatccaccaccctgggaaaacctaaaaaagatgactgcaa 64
||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 205 gaattctcatccccacagaagatccaccaccctgggaaaacctaaaaaagatggctgcaa 264
Query: 65 agcatgctaagcaaggaagttcagtcagagaggaactagttaacttaatcttacttttcc 124
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 265 agcatgctaagcaaggaagttcagtcagagaggatctagttaacttaatcttacttttcc 324
Query: 125 ttatgctcacatatcataatttaaaatgtaaactttgaagataattataagcaatgatgc 184
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttatgctcacatatcataatgtaaaatgtaaactttgaagataattataagcaatgatgc 384
Query: 185 tattgtgatattatatactactttggattgtctgttttccagaattaaaatcaaatttta 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tattgtgatattatatactactttggattgtctgttttccagaattaaaatcaaatttta 444
Query: 245 acgtatggaaatgggaattttattgaatcattatcacctgactatgaaatacaaatccaa 304
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 atgtatggaaatgggaattttattgaatcattatcacctgactatgaaatacaaatccaa 504
Query: 305 gtgaaggtacaacacataaattatataaaggaatacctttcctattgcctagaagactag 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gtgaaggtacaacacataaattatataaaggaatacctttcctattgcctagaagactag 564
Query: 365 aatctacaatccttccacgttgtactccatgaaaatttggccaatataccttggctggat 424
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 aatctacaattcttccacgttgtactccatgaaaatttggccaatataccttggctggat 624
Query: 425 gatagtttcagtatccatatagtcttcaaggtcatatagtttgaaaggagaaacacacaa 484
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 625 gatagtttcagtatccatatagtcttcaaggtcatatagtttggaaggagaaacacacaa 684
Query: 485 gggtgtttgaagggacagtgcaagtaattaatgagaaactatttaaatattctaaatatg 544
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 685 gggtgtttgaagggacagtgcaagtaattaatgagaaactatttaaatgttctaaatatg 744
Query: 545 tacagttagatagaacaaatctaatgtgatagattgcaactctctatgttaatatgaaat 604
|||||||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 745 tacagttagatagaacaagtctgatgtgatagattgcaactctctacattaatatgaaat 804
Query: 605 ggatttatattaaggagcaaaagtgctgtattatatgtgagaaagagcaatgatttgtaa 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 ggatttatattaaggagcaaaagtgctgtattatatgtgagaaagagcaatgatttgtaa 864
Query: 665 agacaa 670
||||||
Sbjct: 865 agacaa 870
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 670
Length of database: 1070
Length adjustment: 10
Effective length of query: 660
Effective length of database: 1060
Effective search space: 699600
Effective search space used: 699600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no478_f24.g1 MSMg01no478_f24.g1 CHROMAT_FILE:
MSMg01no478_f24.g1 PHD_FILE: MSMg01no478_f24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:58:05 2005
(641 letters)
>mm_chr15_23491972_23493018
Length = 1047
Score = 1160 bits (600), Expect = 0.0
Identities = 633/648 (97%), Gaps = 8/648 (1%)
Strand = Plus / Minus
Query: 1 ctcatccaaaagagggctatgagtcaaagagcatggtgggaagagtgtataccctcagga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 847 ctcatccaaaagagggctatgagtcaaagagcatggtgggaagagtgtataccctcagga 788
Query: 61 agaatgatgacctaataaacagaaaaattgttttccacgtggggaacattgctaaatgtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 787 agaatgatgacctaataaacagaaaaattgttttccacgtggggaacattgctaaatgtg 728
Query: 121 ctcaaattccgtagttcctaagaaccaatacctctttactgaatgtgtgtttttctgtgt 180
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 727 ctcaaattccgtagttcctaagaaccaatacctctttactgaacgtgtgtttttctgtgt 668
Query: 181 gatggtgcctgttgtgtttgataaggactaattccctgtatctttatctacctgtcaaga 240
|||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 667 gatggtgcatgttgtgtttgataaggactaactccctgtatctttatctacctgtcaaga 608
Query: 241 gtatctgtgtctacaactaaagactattaaatgtctccgtatattgagcctcagttcatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 gtatctgtgtctacaactaaagactattaaatgtctccgtatattgagcctcagttcatt 548
Query: 301 actggataaaatggggatactttatttagaacaaagcatttttttttcaatgatgaagaa 360
||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||
Sbjct: 547 actggataaaatggggatactttgtttagaacaaagcatttttttt-caatgatgaagaa 489
Query: 361 atagacatgcacatcataataaggagaatggtatggtttcatcaatgtctctcttctttc 420
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 atagacatgcacattataataaggagaatggtatggtttcatcaatgtctctcttctttc 429
Query: 421 tctaaaaaccatttctctaagattctctaatccattcaaaactgctccaataattctcta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tctaaaaaccatttctctaagattctctaatccattcaaaactgctccaataattctcta 369
Query: 481 agaaagatccctatcccacctttgctatgtttcattatggactttgcagtgtctctcccc 540
|||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 agaacgatccctatcccacttttgctatgtttcattatggactttgcagtgtctctcccc 309
Query: 541 atccttacccacagaggattaaatatatgacccaagctttgatgcacttctgtgaatgga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 atccttacccacagaggattaaatatatgacccaagctttgatgcacttctgtgaatgga 249
Query: 601 gtgatccatatt-------ccccccccctttggctctgtcatcagaac 641
|||||||||||| |||||||||||||||||||||||||||||
Sbjct: 248 gtgatccatatttttcctcccccccccctttggctctgtcatcagaac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 641
Length of database: 1047
Length adjustment: 10
Effective length of query: 631
Effective length of database: 1037
Effective search space: 654347
Effective search space used: 654347
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
