Query= MSMg01no478_o23.b1 MSMg01no478_o23.b1 CHROMAT_FILE:
MSMg01no478_o23.b1 PHD_FILE: MSMg01no478_o23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:58:45 2005
(673 letters)
>mm_chr15_31452814_31453886
Length = 1073
Score = 806 bits (417), Expect = 0.0
Identities = 432/437 (98%), Gaps = 1/437 (0%)
Strand = Plus / Minus
Query: 237 acagaagctttgtgtttgaagcaggtgttgacaggtgtcctcctcctgaggaatgtgttc 296
|||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1073 acagaagctttg-gacagaagcaggtgttgacaggtgtcctcctcctgaggaatgtgttc 1015
Query: 297 tccttggcttgggtatggttatcttctccctctggtcttccatctgcacagatgtgtgtc 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1014 tccttggcttgggtatggttatcttctccctctggtcttccatctgcacagatgtgtgtc 955
Query: 357 tcaatctcttcttacaagaacagtcatactgcttaggtcccacactaacaactacactgt 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 954 tcaatctcttcttacaagaacagtcatactgcttaggtcccacactaacaactacactgt 895
Query: 417 taacttaatcatcttttcaaatgtggtcacatctgagaggtttttctggtgggagggatg 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 894 taacttaatcatcttttcaaatgtggtcacatctgagaggtttttctggtgggagggatg 835
Query: 477 aggtagcctgctcagttcttgtggctcagaagccagtgaagcatcccctcaactcttatt 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 834 aggtagcctgctcagttcttgtggctcagaagccagtgaagcatcccctcaactcttatt 775
Query: 537 tgtgattgtttaacctcagcatcatagtctttcttatttttctgccctttctttacttct 596
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 774 tgcgattgtttaacctcagcatcatagtctttcttatttttctgccctttctttacttct 715
Query: 597 tcttgatggtgtattctaaagatggaaataggtttaataaagtacaatttgcacccagtg 656
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 714 tcttgatggtgtattctaaagatggaaataggtttaataaagtacaatttgcacccagtg 655
Query: 657 aaacttacattttggta 673
|||||||||||||||||
Sbjct: 654 aaacttacattttggta 638
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 673
Length of database: 1073
Length adjustment: 10
Effective length of query: 663
Effective length of database: 1063
Effective search space: 704769
Effective search space used: 704769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no478_o23.g1 MSMg01no478_o23.g1 CHROMAT_FILE:
MSMg01no478_o23.g1 PHD_FILE: MSMg01no478_o23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:58:45 2005
(381 letters)
>mm_chr15_31344225_31345005
Length = 781
Score = 692 bits (358), Expect = 0.0
Identities = 373/378 (98%)
Strand = Plus / Plus
Query: 1 aaatgttaactggggaacgtgctgacagccaagcagatgccctcttgctgcttgcgcatc 60
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 201 aaatgttaactggggaacgtgctgacagccaagcagatgatctcttgctgcttgcgcatc 260
Query: 61 cttctgaagactccttgtttctctgaaaacggctgatgtcaggtcctgcacaaaggtccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cttctgaagactccttgtttctctgaaaacggctgatgtcaggtcctgcacaaaggtccc 320
Query: 121 gcctctgctccaaggaattcaggcacaaagtccagaaaccatggaaaggaaagagcagac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcctctgctccaaggaattcaggcacaaagtccagaaaccatggaaaggaaagagcagac 380
Query: 181 acggggataaagaggctacaagatacaaccagatgactctccttttcatctcttcagtta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acggggataaagaggctacaagatacaaccagatgactctccttttcatctcttcagtta 440
Query: 241 aaccatatctagattcgggggtggggggtgggggctgtggggtgggcagggggcagcgac 300
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaccatagctagattcgggggtggggggtgggggctgtggggtgggcagggggcagcgac 500
Query: 301 acagtgatagagcacttgcttagcttgcacaaagccccagggttcagtgcctagcctgta 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tcagtgatagagcacttgcttagcttgcacaaagccccagggttcagtgcctagcctgta 560
Query: 361 ggggggtggggatggggg 378
||||||||||| ||||||
Sbjct: 561 ggggggtgggggtggggg 578
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 381
Length of database: 781
Length adjustment: 9
Effective length of query: 372
Effective length of database: 772
Effective search space: 287184
Effective search space used: 287184
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
