Query= MSMg01no479_d23.b1 MSMg01no479_d23.b1 CHROMAT_FILE:
MSMg01no479_d23.b1 PHD_FILE: MSMg01no479_d23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:59:10 2005
(635 letters)
>mm_chr15_81418816_81419850
Length = 1035
Score = 1201 bits (621), Expect = 0.0
Identities = 633/639 (99%), Gaps = 4/639 (0%)
Strand = Plus / Plus
Query: 1 cccaagtgctggatttaaaggcaggtgccaccaggaccaccaacttctagagtcttaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 cccaagtgctggatttaaaggcaggtgccaccaggaccaccaacttctagagtcttaaaa 256
Query: 61 aatttcaatactgagattggtttattcttagtagtaaggattatagtaatattagtaatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 aatttcaatactgagattggtttattcttagtagtaaggattatagtaatattagtaatt 316
Query: 121 tttcttctcttaacattgtagtgacggttaaattttttttcttttaaaatttatatacca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 tttcttctcttaacattgtagtgacggttaaattttttttcttttaaaatttatatacca 376
Query: 181 ttaggtcggttttattttgttttgagacagggtttttgtagctctgactatcctagaact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 ttaggtcggttttattttgttttgagacagggtttttgtagctctgactatcctagaact 436
Query: 241 ctccatgttgataatactgcccttaagctcacagagccacctgcttctgcctcctgtttg 300
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 ctccatgttgataagactgcccttaagctcacagagccacctgcttctgcctcctgtttg 496
Query: 301 ctggggttaaaggcctgtgtctcaaggacctgcttgtttcttttcctttttttttttttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 ctggggttaaaggcctgtgtctcaaggacctgcttgtttcttttcctttttttttttttt 556
Query: 361 tttttt----aatttgatacagggtatcactacatagccctgactggcctacaatctaga 416
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 ttttttttttaatttgatacagggtatcactacatagccctgactggcctacaatctaga 616
Query: 417 gagaaatgattgactctgcctcccttccccatggtgggattaaaggtgtgtgccaccaag 476
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 617 gagaaatgattgactctgcctcccttcctcatggtgggattaaaggtgtgtgccaccaag 676
Query: 477 cccaacaggtatataatttaaattataccagcctagttttctagttttttgtcagggttg 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 cccaacaggtatataatttaaattataccagcctagttttctagttttttgtcagggttg 736
Query: 537 ggcgaatgaatttaccatgtgggtgccattacgtacattttggtagttctttggatccag 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 ggcgaatgaatttaccatgtgggtgccattacgtacattttggtagttctttggatccag 796
Query: 597 aaacgtgatagtaatacatttttaggcaacttgtaagga 635
|||||||||||||||||||||||||||||||||||||||
Sbjct: 797 aaacgtgatagtaatacatttttaggcaacttgtaagga 835
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 49
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 635
Length of database: 1035
Length adjustment: 10
Effective length of query: 625
Effective length of database: 1025
Effective search space: 640625
Effective search space used: 640625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no479_d23.g1 MSMg01no479_d23.g1 CHROMAT_FILE:
MSMg01no479_d23.g1 PHD_FILE: MSMg01no479_d23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:59:10 2005
(342 letters)
>mm_chr15_81662740_81663481
Length = 742
Score = 553 bits (286), Expect = e-162
Identities = 324/342 (94%), Gaps = 11/342 (3%)
Strand = Plus / Minus
Query: 1 tcagtgttcttatctgtaaagtgggtagaaaatacttcaaaagggggggtgggtgggtgt 60
|||||||||| ||||||||||||||||||||||||||||||| |||||| |||||||
Sbjct: 676 tcagtgttctcatctgtaaagtgggtagaaaatacttcaaaa--gggggt---tgggtgt 622
Query: 61 gtagctcagtggtagaacacatacctatcatgtttgctgtcttgagttcagttacacaca 120
||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||
Sbjct: 621 gtagctcagtggtagaacacatacctatcatgtttactgccttgagttcagttacacaca 562
Query: 121 cacacacacacactcacacacacacggcttaaaggattattctgagaatgaaacagatca 180
|||||||| |||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 561 cacacaca------cacacacacatggcttaaaggattattctgagaatgaaacagatca 508
Query: 181 ccatttacacataaatgtttgatgaatgttcagaaattcagctagcctgactctgaacat 240
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 ccgtttacacataaatgtttgatgaatgttcagaaattcagctagcctgactctgaacat 448
Query: 241 agggaaataaccttctctatcactccctcaccccctcagcccctgcttccaacccccgac 300
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 447 agggaaataaccttctccatcactccctcaccccctcagcccctgcttccaacccccaac 388
Query: 301 ccccaagcaggttcacacagtctccttgtttaggggccaggg 342
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 ccccaagcaggttcacacagtctccttgtttaggggccaggg 346
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 342
Length of database: 742
Length adjustment: 9
Effective length of query: 333
Effective length of database: 733
Effective search space: 244089
Effective search space used: 244089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
