Query= MSMg01no479_h15.b1 MSMg01no479_h15.b1 CHROMAT_FILE:
MSMg01no479_h15.b1 PHD_FILE: MSMg01no479_h15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:59:29 2005
(608 letters)
>mm_chr15_27504701_27505708
Length = 1008
Score = 1052 bits (544), Expect = 0.0
Identities = 588/612 (96%), Gaps = 17/612 (2%)
Strand = Plus / Minus
Query: 1 gctgcgtaggttgtccactgcccagaagtgccttgccagctccacctgccaagatccatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 729 gctgcgtaggttgtccactgcccagaagtgccttgccagctccacctgccaagatccatt 670
Query: 61 tggatcgttgcctctctccactgtgtacaaaggggccagagaaggcccccgagtcagcca 120
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 669 tggatcgttgcctctctccactgtgtacaaaggggccagagaaggcccccaagtcagcca 610
Query: 121 cgtccgtgctttgcatagattcttttccacttctcctggagaagaggggccctgttcttg 180
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 agtccctgctttgcatagattcttttccacttctcctggagaagaggggccctgttcttg 550
Query: 181 gcaccagctccccaaaactaaagcagtggagaatctaaaaagagaaatgcccagtgctct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 gcaccagctccccaaaactaaagcagtggagaatctaaaaagagaaatgcccagtgctct 490
Query: 241 taaagg----tttttttgtgaggtcagatggaggccagtctactgttagcagccgaagct 296
|||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 taaagggcca----tttgtgaggtcagatggaggccagtctactgttagcagccgaagct 434
Query: 297 gttagagatcctctgttcacccacgatttgttgagtcaggaagagttcaaaggagaaggg 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 gttagagatcctctgttcacccacgatttgttgagtcaggaagagttcaaaggagaaggg 374
Query: 357 atccccaaacgagatttgaattaatgagaagaattctgtaaatttagcagccagatctac 416
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 373 atccccaaacgagatttgaattaatgagaagaattctgtaaatttagcagccatatctac 314
Query: 417 tggcttttatggagctggcctaggttgtggaaacaggtgctctgacatctgtttctgtga 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 tggcttttatggagctggcctaggttgtggaaacaggtgctctgacatctgtttctgtga 254
Query: 477 cacctgtgtcccggcagtatgactggaaagacatgtgccactctggtgagtgattttttt 536
|||||||| ||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 253 cacctgtgccccggcagtatgactgggaagacatgtgccactctggtgagtga------- 201
Query: 537 tttttttttttttacttcagccccaaatctagagcccagcaggaagtatgacaagcattg 596
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 200 --tttttttttttacttcagccccaaatctagagcccatcaggaagtatgacaagcattg 143
Query: 597 tgggcatgcgtg 608
||||||||||||
Sbjct: 142 tgggcatgcgtg 131
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 42
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 608
Length of database: 1008
Length adjustment: 10
Effective length of query: 598
Effective length of database: 998
Effective search space: 596804
Effective search space used: 596804
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no479_h15.g1 MSMg01no479_h15.g1 CHROMAT_FILE:
MSMg01no479_h15.g1 PHD_FILE: MSMg01no479_h15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:59:29 2005
(657 letters)
>mm_chr15_27341357_27342413
Length = 1057
Score = 1193 bits (617), Expect = 0.0
Identities = 647/657 (98%)
Strand = Plus / Plus
Query: 1 agagagaggtgggacttggaaacctgaggtccaatgtggaatggctgagaagtgtccaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agagagaggtgggacttggaaacctgaggtccaatgtggaatggctgagaagtgtccaga 260
Query: 61 cgagatgtcctacacaacgatgcaagccttagcttctctttgagcccacacaggcctgtt 120
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cgagatgtcctacgcaacgatgcaagccttagcttctctttgagcccacacaggcctgtt 320
Query: 121 tgtggactgccaagcaccattgccatcccaaggcacctcagagcaaaaatgacagggaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgtggactgccaagcaccattgccatcccaaggcacctcagagcaaaaatgacagggaaa 380
Query: 181 gggcacacaatcaggtctcaggtccccacactgggaggcacagaggagtctccaagtcct 240
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gggcacacaaacaggtctcaggtccccacactgggaggcacagaggagtctccaagtcct 440
Query: 241 tgtgttttattcagaagccgtcattagaaaatgcagcctaggcagagagaagatgggtga 300
|||| || | ||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgtggttaaatcagaagccatcattagaaaatgcagcctaggcagagagaagatgggtga 500
Query: 301 gctgagacctgaaaccaatacagatgcccaggtaaaacaggaaaataagctaagcagggg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gctgagacctgaaaccaatacagatgcccaggtaaaacaggaaaataagctaagcagggg 560
Query: 361 acactacatgaacaaggaatagatcctgcaggagagcataaagtcactcgccggaagttg 420
|||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 acactatatgaacagggaatagatcctgcaggagagcataaagtcactcgccggaagttg 620
Query: 421 attaactcctctctcctctctgacatattccaagcatctttcttggtgtgagcagactaa 480
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 attaactcctgtctcctctctgacatattccaagcatctttcttggtgtgagcagactaa 680
Query: 481 aaatggccatttaactatgagatttaacaatgagagcagaagcaggctctgaggccgata 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aaatggccatttaactatgagatttaacaatgagagcagaagcaggctctgaggccgata 740
Query: 541 cccaggggagccgatctctaggtgtgcttcctgggtacagcaaatgagctagctactgag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 cccaggggagccgatctctaggtgtgcttcctgggtacagcaaatgagctagctactgag 800
Query: 601 aggagcatgggaagaagcaggcatttactagagagccattcagatctctgacacaag 657
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 aggagcatgggaaaaagcaggcatttactagagagccattcagatctctgacacaag 857
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 657
Length of database: 1057
Length adjustment: 10
Effective length of query: 647
Effective length of database: 1047
Effective search space: 677409
Effective search space used: 677409
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
