Query= MSMg01no480_o15.b1 MSMg01no480_o15.b1 CHROMAT_FILE:
MSMg01no480_o15.b1 PHD_FILE: MSMg01no480_o15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:01:22 2005
(573 letters)
>mm_chr15_27635568_27636540
Length = 973
Score = 946 bits (489), Expect = 0.0
Identities = 557/591 (94%), Gaps = 18/591 (3%)
Strand = Plus / Minus
Query: 1 ctgatcctggagaatctaaagacaaaacttgagagcaagcggctacgccgtgttatcctt 60
|||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||
Sbjct: 638 ctgatcctggagaatctaaagacaaaacttgagagcaagcagctaagccgtgttatcctt 579
Query: 61 caagtggagcatagacatt------------------cactgcagagcaggggagagtcc 102
||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 578 caagtggagcatagacattcagcaagaccggtaaccacactgcagagcaggggagagtcc 519
Query: 103 taggaaggggacaaagtgatctaggacacctctggcggtcggctgcatgtgcaggtacag 162
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 taagaaggggacaaagtgatctaggacacctctggcggtcggctgcatgtgcaggtacag 459
Query: 163 gtagcggaaagctttctcagtctgatgtggacttcgtgaatacgggagctgagaaatggg 222
|||||||||||||||||| ||||||||||||||||||||||| || ||||||||||||||
Sbjct: 458 gtagcggaaagctttctcggtctgatgtggacttcgtgaatatggaagctgagaaatggg 399
Query: 223 ctgtgctttcccgactgacattgtggaagaggcagggtcagtcacgccttgagtgcctga 282
| ||||||||||||| |||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 398 ccgtgctttcccgacagacactgaggaagaggcagggtcagtcacgccttgagtgcctga 339
Query: 283 tgaagacgctaggtctcagttactccttagacactactgtgcacaatgtcttgtgtctgc 342
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 tgaagacgctaggtctcagttactccttagacactactgtgcacaatgtcttgtgtctgt 279
Query: 343 cactattctgagagacaccagctgaggggggattccaatgcagaggtgctggcaaccctg 402
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 278 cactattctgagagacaccagctgaggggggattccagtgcagaggtgctggcaaccctg 219
Query: 403 ccttcctggagtgtgaaggggctgccaggcagtcagagtgcaggggtggcatccagtaga 462
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 ccttcctggagtgtgaaggggctgccaggcagtcagagtgcaggggtggcatccagtaga 159
Query: 463 cagtactctaagggagcatgaggagtcactttaagctcttcagtaggttggaaggatggg 522
||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 158 cagcactctaagggagcaggaggagtcactttaagctcttcagtaggttggaaggatgag 99
Query: 523 aaagcaagaaatgaacctctaggtgaagaaactgggtgtttctgggtcgtc 573
||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 98 aaagcaagaaatgaacctctaggtgaagaaactgggtgtctctgggtcgtc 48
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 573
Length of database: 973
Length adjustment: 10
Effective length of query: 563
Effective length of database: 963
Effective search space: 542169
Effective search space used: 542169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no480_o15.g1 MSMg01no480_o15.g1 CHROMAT_FILE:
MSMg01no480_o15.g1 PHD_FILE: MSMg01no480_o15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:01:22 2005
(249 letters)
>mm_chr15_27452958_27453606
Length = 649
Score = 426 bits (220), Expect = e-124
Identities = 241/248 (97%)
Strand = Plus / Plus
Query: 2 acagtgtcaactagtgtggaggagtccctgggcccatgctccaacaatgcataagtaaat 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 acagtgtcaactagtgtggaggagtccctgggcccatgctccaacaatgcataagtaaat 261
Query: 62 aaacaataagaatgagtggacactcgtggtcaccaggctaggtgttggcagggtttgcaa 121
||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 262 aaacaataagaataagtggacactcgtggtcaccaggctaggtattggcagggtttgcaa 321
Query: 122 acactggtgtttgttttcagaaagagcgtagacattttcagggttgatgcttcatagcat 181
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 322 acactggtgtttgttttcaggaagagcgtagacattttcagggttgatgcttcatagcat 381
Query: 182 atgagaaagttctttgtaaagataggagagaggtaaagcaaccagaactggttggccctt 241
|||||||||| ||||||||||||| |||||||||||||||||||||||||||| |||||
Sbjct: 382 atgagaaagtcctttgtaaagataatagagaggtaaagcaaccagaactggttgtccctt 441
Query: 242 gtgattcc 249
||||||||
Sbjct: 442 gtgattcc 449
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 649
Length adjustment: 9
Effective length of query: 240
Effective length of database: 640
Effective search space: 153600
Effective search space used: 153600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
