Query= MSMg01no481_k10.b1 MSMg01no481_k10.b1 CHROMAT_FILE:
MSMg01no481_k10.b1 PHD_FILE: MSMg01no481_k10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:02:21 2005
(385 letters)
>mm_chr15_57484705_57485487
Length = 783
Score = 439 bits (227), Expect = e-127
Identities = 331/393 (84%), Gaps = 51/393 (12%)
Strand = Plus / Plus
Query: 1 tgaaataacaaaggggccagtgagatggctcagcgagtaaaggtgattgccaccaagcct 60
|||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 217 tgaaataacaaaggggccagtgagatggctcagcaaggaaaggtgattgccaccaagcct 276
Query: 61 ggtgacctgagatcaattccagaaactgtggactgtggcacaatgactctctctctctct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 ggtgacctgagatcaattccagaaactgtggactgtggcacaatgactctctctctctct 336
Query: 121 ctctctctctctctctctctctctctctctctctctctctctctctctccctctcccaat 180
||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 337 ctctctctctctctctctctctctctctctctctctctc----------------ccaat 380
Query: 181 ttatacacaaattatacatcaataaatgtaatgaaaattaacaaacatgaacaataaaa- 239
| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acagacacaaattatatatcaataaatgtaatgaaaattaacaaacatgaacaataaaaa 440
Query: 240 ttatcatgtttttc-----ttttcataaataccttccttttaatagtttgttatctctga 294
|||||||| | |||||||||||||||||||||||||||||| ||||||||
Sbjct: 441 ttatcatg-----cgcagcttttcataaataccttccttttaatagttt---atctctga 492
Query: 295 cactaattgaaaatgtc--atttaaagtccctgcgatggcagaaagacaacccgc---aa 349
||||||||||| | ||| ||| ||| ||||||||||| | ||
Sbjct: 493 aactaattgaaa----ctaattgaaa---------atgtcagaaagacaa---gtgttaa 536
Query: 350 ctatttactagggggttttggaaatggttcagt 382
|||||||||| ||||||||||||||||||||||
Sbjct: 537 ctatttactaaggggttttggaaatggttcagt 569
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 66
Number of extensions: 31
Number of successful extensions: 31
Number of sequences better than 10.0: 1
Number of HSP's gapped: 21
Number of HSP's successfully gapped: 1
Length of query: 385
Length of database: 783
Length adjustment: 9
Effective length of query: 376
Effective length of database: 774
Effective search space: 291024
Effective search space used: 291024
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no481_k10.g1 MSMg01no481_k10.g1 CHROMAT_FILE:
MSMg01no481_k10.g1 PHD_FILE: MSMg01no481_k10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:02:21 2005
(352 letters)
>mm_chr15_57690061_57690811
Length = 751
Score = 611 bits (316), Expect = e-179
Identities = 339/350 (96%), Gaps = 9/350 (2%)
Strand = Plus / Minus
Query: 4 gggatgggttaatggtccaggttctaacttcaccatagcctggccttgattaacctgcac 63
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 gggatgagttaatggtccaggttctaacttcaccatagcctggccttgattaacctgcac 420
Query: 64 ctagggagatgcagaggcctgagctttcccgtctctcacgagaaatacataatcattaat 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 ctagggagatgcagaggcctgagctttcccgtctctcacgagaaatacataatcattaat 360
Query: 124 caacattactgggtcccactcagactaagtggcctcttgtgattaggaaggggctcttga 183
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 caacattactgggtcccactcagactaagtggcctcttgtgattaggaaggggctcttg- 301
Query: 184 aaaaaaaagcagtctttttagcattttgctatcttgaacatgtgcatttgacaatggctt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 aaaaaaaagcagtctttttagcattttgctatcttgaacatgtgcatttgacaatggctt 241
Query: 244 ttttgatgggttg--tgggaagagctgctgtgcagagt----tttctctctctctctctc 297
|||||||||| | ||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 240 ttttgatggg--ggctgggaagagctgctgtgcagagttctctttctctctctctctctc 183
Query: 298 tctctctctctctctctctctctctctctctctctctctctctctctctc 347
||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 tctttctctctctctctctctctctctctctctctctctctctctctctc 133
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 101
Number of extensions: 31
Number of successful extensions: 31
Number of sequences better than 10.0: 1
Number of HSP's gapped: 25
Number of HSP's successfully gapped: 1
Length of query: 352
Length of database: 751
Length adjustment: 9
Effective length of query: 343
Effective length of database: 742
Effective search space: 254506
Effective search space used: 254506
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
