Query= MSMg01no481_l11.b1 MSMg01no481_l11.b1 CHROMAT_FILE:
MSMg01no481_l11.b1 PHD_FILE: MSMg01no481_l11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:02:26 2005
(674 letters)
>mm_chr15_20918346_20919419
Length = 1074
Score = 1197 bits (619), Expect = 0.0
Identities = 661/679 (97%), Gaps = 10/679 (1%)
Strand = Plus / Minus
Query: 1 tatttattaggctcattcaggggacagatttgtgagctctgtttggatctcatctgctgc 60
||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||
Sbjct: 874 tatttattaggctcattcaggggacaggtttgtgagctctgtttggatctcatctgatgc 815
Query: 61 attctggggcaatgatctcttgtaaatctatgaactcaattatagccagaattaacattt 120
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 814 attcttgggcaatgatctcttgtaaatctatgaactcaattatagccagaattaacattt 755
Query: 121 tatacattaaatttcataagctacacttggttgaacagaataactgaattaaaatatgat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 754 tatacattaaatttcataagctacacttggttgaacagaataactgaattaaaatatgat 695
Query: 181 ttataattacatccttatcaatcactccaagagagccaacgatctgtgtatttggtcctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 694 ttataattacatccttatcaatcactccaagagagccaacgatctgtgtatttggtcctc 635
Query: 241 tgttttc-tattattattgtgcagctccttgtcaggtaataagagtaatcagtttcaggc 299
||||||| | ||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 tgttttcat-ttaaaattgtgcagctccttgtcaggtaataagagtaatcagtttcaggc 576
Query: 300 aatagacaatggatttttgcagtacagtcacatttgta----atcccccaccaacggcac 355
|||||||||||||||||||||||||||||||||||||| || || |||||||||
Sbjct: 575 aatagacaatggatttttgcagtacagtcacatttgtaattgat----cagcaacggcac 520
Query: 356 aacaatttatcattcttgagatgggtactacatgagaaaggttaacccacacaggggagc 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 aacaatttatcattcttgagatgggtactacatgagaaaggttaacccacacaggggagc 460
Query: 416 agtgagcctaagtctgaaacattcacaaatatttcttaccttcttaagggtgagtcaaac 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 agtgagcctaagtctgaaacattcacaaatatttcttaccttcttaagggtgagtcaaac 400
Query: 476 gctttacctgttaaaaatatgggaaaccaggtaaattgactttcttttatcatataattc 535
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 399 gctttacctgttaaaaatatgggaacccaggtaaattgactttcttttatcatataattc 340
Query: 536 agagtcatgcaattaaattgggataaaatcagatgtagtttcatttctgttcttatgaga 595
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 agagtcatgcaattaaattgggataaaatcagatgtagtttcatttctgttcttatgaga 280
Query: 596 aatatttgaagtgaatacacttatggtgctgaaaatatgtcactgtactctgtgatgctg 655
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 279 aatatttgaagtgaatacacttatggtgctgaaaatatgccactgtactctgtgatgctg 220
Query: 656 aaggtttcctgatttatag 674
|||||||||||||||||||
Sbjct: 219 aaggtttcctgatttatag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 674
Length of database: 1074
Length adjustment: 10
Effective length of query: 664
Effective length of database: 1064
Effective search space: 706496
Effective search space used: 706496
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no481_l11.g1 MSMg01no481_l11.g1 CHROMAT_FILE:
MSMg01no481_l11.g1 PHD_FILE: MSMg01no481_l11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:02:26 2005
(674 letters)
>mm_chr15_20746389_20747462
Length = 1074
Score = 1224 bits (633), Expect = 0.0
Identities = 660/669 (98%)
Strand = Plus / Plus
Query: 6 gaattctaggttgtgagaacatgagtgtgtgtgtctatgtttctgtatctatatttgaat 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gaattctaggttgtgagaacatgagtgtgtgtgtctatgtttctgtatctatatttgaat 265
Query: 66 tcattttttgttctttttctttggctcttttttcttctgtttgtttcttctttttgttct 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 tcattttttgttctttttctttggctcttttttcttctgtttgtttcttctttttgttct 325
Query: 126 gtttgtcacagtgtaatttatgtgatttttctcttattttatgtaattgttattcaacag 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 gtttgtcacagtgtaatttatgtgatttttctcttattttatgtaattgttattcaacag 385
Query: 186 atacctgttttatttctaaatcaattttcagtaaaaagtaaataaatcccagatccaaat 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 atacctgttttatttctaaatcaattttcagtaaaaagtaaataaatcccagatccaaat 445
Query: 246 aataaagttagcaaacaaactaataaataaagtgtcttcttcattttattatttagtaag 305
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 446 aataaagttagcaaacaaacaaataaataaagtgtcttcttcattttattatttagtaag 505
Query: 306 atatttagatttctttttatctgtagaatacagtttgctagtattctaagacatgtcagt 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 atatttagatttctttttatctgtagaatacagtttgctagtattctaagacatgtcagt 565
Query: 366 tgcttaattcacctatttagaattaggaaaggactgagtaaggtcctgttagtttgcctt 425
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 tgcttaattcacctctttagaattaggaaaggactgagtaaggtcctgttagtttgcctt 625
Query: 426 gtccagccccactataatggttttgcccatcttattttgtcttgttttttattatttgac 485
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 gtccagcctcactataatggttttgcccatcttattttgtcttgttttttattatttgac 685
Query: 486 tgttgtctcttagaggtctgctcttttctggaggggaaatggagaaacaatgtatttggc 545
|||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 686 tgttgtctcttataggtctgctcttttctggaggggaaatggagaaagaatgtatttggc 745
Query: 546 agacaagagagatgggggtagcagggaggattgagaagaggggaaactggcagtgataga 605
||||||||||||||| |||||| ||||||||||| |||||||||||||||||||||||||
Sbjct: 746 agacaagagagatggaggtagctgggaggattgaaaagaggggaaactggcagtgataga 805
Query: 606 attgtatgagagaagaatctattttaattatacataaacaatacacacatatatacatat 665
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 806 attgtatgagagaagaatctattttaattatacatacacaatacacacatatatacatat 865
Query: 666 gctgaagaa 674
|||||||||
Sbjct: 866 gctgaagaa 874
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 674
Length of database: 1074
Length adjustment: 10
Effective length of query: 664
Effective length of database: 1064
Effective search space: 706496
Effective search space used: 706496
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
