Query= MSMg01no482_c14.b1 MSMg01no482_c14.b1 CHROMAT_FILE:
MSMg01no482_c14.b1 PHD_FILE: MSMg01no482_c14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:03:01 2005
(686 letters)
>mm_chr15_47091750_47092835
Length = 1086
Score = 1234 bits (638), Expect = 0.0
Identities = 672/684 (98%), Gaps = 2/684 (0%)
Strand = Plus / Plus
Query: 5 gaattcacaattgacgaatctggaatggctgagaaacacctaaagaaaagttcaaattcc 64
|||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 gaattcacaattgaagaacctggaatggctgagaaacacctaaagaaaagttcaaattcc 262
Query: 65 ttagtgatcagagaaattaaaatcaaaatgaccttgagactccaccttataccagtcaga 124
|||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||
Sbjct: 263 ttagtgatcagagaaattaaaatcaaaatgaccttgagactccatcttacaccagtcaga 322
Query: 125 atggctaagatcaaaacgtcagttgacagcacatgtggaagaggatgtggagaaagagga 184
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 323 atggctaagatcaaaacgtcaggtgacagcacatgtggaagaggatgtggagaaagagga 382
Query: 185 acactcctctattgctggtgggattgcaaactgatacaaccactctgcaaataaatctgg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 acactcctctattgctggtgggattgcaaactgatacaaccactctgcaaataaatctgg 442
Query: 245 aggttcctcaaaaaattggaaatggatctacctgaagacccagctcttgggaatatactc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 aggttcctcaaaaaattggaaatggatctacctgaagacccagctcttgggaatatactc 502
Query: 305 aaaagatgctccaacttgccacagggcacccgttacactatgttcatagaaataacctag 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 aaaagatgctccaacttgccacagggcacccgttacactatgttcatagaaataacctag 562
Query: 365 atgttccatgacagaaggatggatacagaaaatgtggttcatttagacaatggaatacta 424
||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 atgctccatgacagaagaatggatacagaaaatgtggttcatttagacaatggaatacta 622
Query: 425 cttagctaaagttattttaaactgtaaacgttttaaaaatatatatgcatataaatgtat 484
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 623 cttagctaaagttattttaaactgtaaacgtttaaaaaatatatatgcatataaatgtat 682
Query: 485 acatatatacatatacacacacgcatatatatatatgtatgtatatata--tacatatat 542
||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 683 acatatatacatatacacacacgcatatatatatatgtatgtatatatacatatatatat 742
Query: 543 atataattatacactcacacatatgtactgtcatagttttgtaaaacatctacatgtgtt 602
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 atataattatacacacacacatatgtactgtcatagttttgtaaaacatctacatgtgtt 802
Query: 603 tagattttgaatagaaatcattctactattcacaaggcttatatatttttcctaggcctt 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 tagattttgaatagaaatcattctactattcacaaggcttatatatttttcctaggcctt 862
Query: 663 acctagtatttccatgatattctg 686
||||||||||||||||||||||||
Sbjct: 863 acctagtatttccatgatattctg 886
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 45
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 686
Length of database: 1086
Length adjustment: 10
Effective length of query: 676
Effective length of database: 1076
Effective search space: 727376
Effective search space used: 727376
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no482_c14.g1 MSMg01no482_c14.g1 CHROMAT_FILE:
MSMg01no482_c14.g1 PHD_FILE: MSMg01no482_c14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:03:01 2005
(648 letters)
>mm_chr15_47131170_47132217
Length = 1048
Score = 1230 bits (636), Expect = 0.0
Identities = 645/648 (99%)
Strand = Plus / Minus
Query: 1 atttattattttatttagtcctttgtatgaagaaatatagaaaacatagtgtaatctgtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 848 atttattattttatttagtcctttgtatgaagaaatatagaaaacatagtgtaatctgtc 789
Query: 61 attttatttttaatttcactgttattctaataactgacttaacaggaagtaaacaccagc 120
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 788 attttatttttaatttcactgttattctaataactgacttaacaggaaggaaacaccagc 729
Query: 121 aggtatagttgtcagtccctctttttttagtggttacagtttattagttatctcctctag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 728 aggtatagttgtcagtccctctttttttagtggttacagtttattagttatctcctctag 669
Query: 181 gaaggattgagctggtcattatatccatggacataattacatgctcttctagttaaaggg 240
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 668 gaaggattgagctggtcattatatccatggacataattacatgctattctagttaaaggg 609
Query: 241 ctggttgtgagaaaacacctttttaaaaacctcacactgaaattaattatagattttatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 ctggttgtgagaaaacacctttttaaaaacctcacactgaaattaattatagattttatt 549
Query: 301 tttaccagagttatttctttactcatgcattaatgaaatcataatttcctaattaataaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 tttaccagagttatttctttactcatgcattaatgaaatcataatttcctaattaataaa 489
Query: 361 ttagtaaattaacaaaatatgtagaaacatattagacaagacaacaagttacacataggg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 ttagtaaattaacaaaatatgtagaaacatattagacaagacaacaagttacacataggg 429
Query: 421 acacacatgcccagggcagatatcagcagcataatgacatgtgagacctgcagatgaaat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 acacacatgcccagggcagatatcagcagcataatgacatgtgagacctgcagatgaaat 369
Query: 481 aaaaggggtcacacagccatttaatgagactgcgaaagcaccagctgttgctgctggaaa 540
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 aaaaggggtcacgcagccatttaatgagactgcgaaagcaccagctgttgctgctggaaa 309
Query: 541 caggagttcacatctcagcatctgggtcacagtttgccatatgaggaggaaaatgacaaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 caggagttcacatctcagcatctgggtcacagtttgccatatgaggaggaaaatgacaaa 249
Query: 601 agagcttaatgtggtagggcaaatgttatgtttccttcatttcagtca 648
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 agagcttaatgtggtagggcaaatgttatgtttccttcatttcagtca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 648
Length of database: 1048
Length adjustment: 10
Effective length of query: 638
Effective length of database: 1038
Effective search space: 662244
Effective search space used: 662244
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
