NNNTTCCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCTTCCTATCCCTGAAGCTTTATAGTGAACCTGGCATCTCAT
CATCTCTAGGATCTGAAAGCAGCATGCTAGAACACAGTAAAGAATTTTGT
TTTCTCCTCCAATGCTTAAGATGTGCTTATAGATGGAACTTCCTTTTAAA
AAGATTAATTATTTGTTTACATCCCAAATGTTACCCCCCTCCCAGTCACC
CCCACAATGTTACTTCCCTATCCCCATCCCCTTCGACTATGAGAGAGCAA
CACTGCCTTCCACCAGGTGACCCCCTACTCTGTTGCATCAAGTCTTTGCA
GGATTAGGCACATCCTCTCCTACTGAGGCCAGGCATGGCAGCCCTCTGCT
ACATATGTGTTGGAGGCCTCTGACCAGCCTTTGTGTACTCCTTGGTTGGT
GGCTCAGTCAATGGGAGCTCCCAGGGGTACAGATTCGTTGATTCTGTTGA
TCTTTCTGTGTGGTTGTCATCTTCTTAAGGGCCTTTCATCCTTCCCCTAA
CTCTTCCACAGGGGTCAAGGCCTGCATCCAATATTTGTGGGTATCTGCAT
CTGTCTCTGTCTGTCAGTTGCTGAGTAGAGCCTCTCAGAGGTCTGCTATG
CTTCTTGATGCACAGAAAAGTTAGAAATGGTCCAACTGATCAACTTCCTC
TCATATAGTCAGTCATGCAGCCATGGTGGGTTAGATTTGGAAGGCCGATA
CACTTACACAGGGAGCCAGGTACTGGAC

NCCCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXCCAGTACTTTATTTCAAAGTTTTA
ATTAGAACAGTACAGTATTTCCAAAAGAAGAAAATAAATTGGTGGGGGTG
GGAGCCTGGAAATGGATCTACACAAATGTGACTGATTGAATATTGACAAG
ATACAAAATCAATTCAGTGCAAAACAAAACAAAACAAAAAATGTAAATTT
TCTCCCAATGAATGTTTCTACAACTGGACCCCATAATGAAAAACAAAACA
AAACATTGACTTAAGCCTTATTATCTTATACAAAAATTAACTCTAAAGGA
ATCGTGTATGTAAATGCAAAACACAAAGTTACTAAAATTTAAAAGAATAC
TTAAGAGAAAATATTCATGTTACTGAGGTAGGCAGACATTCTCAGATATA
AAACTAAAAGCAGACTACCCCTTGCTGCTGGTGGCATTGAATGGGCCAGT
TGGGACAGGACAGGAGAGCTTGTCTTGGTGGTCTGGGTGTTGGAGAGCAG
CAGATTGACCAGCTCAGATACATCTCGGGCCAGGGCCAGGGCCAGGGCTT
TGAATTGGTCCACGCTAACCTCTACCCAATGCATGAACTGCGGGAGTGCA
TGGAAGGGCCATTCCTACAGATCCAAAACTACAGGATCTCCGTAACAGGA
CAACAAGATATCTGAGAGGAGTTCCCACAGTATCATTATTGATAGAGTAA
GAAAGCCCGAAGACACNTCCCGATACACAGTCATTTC

Query= MSMg01no483_b20.b1 MSMg01no483_b20.b1 CHROMAT_FILE:
MSMg01no483_b20.b1 PHD_FILE: MSMg01no483_b20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:04:11 2005
         (574 letters)



>mm_chr15_11222159_11223132
          Length = 974

 Score = 1056 bits (546), Expect = 0.0
 Identities = 565/572 (98%), Gaps = 2/572 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcttcctatccctgaagctttatagtgaacctggcatctcatcatctctaggatct 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttcctatccctgaagctttatagtgaacctggcatctcatcatctctaggatct 264

                                                                       
Query: 65  gaaagcagcatgctagaacacagtaaagaattttgttttctcctccaatgcttaagatgt 124
           |||||||||||| | ||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 265 gaaagcagcatgttggaacacagtaaaggattttgttttctcctccaatgcttaagatgt 324

                                                                       
Query: 125 gcttatagatggaacttccttttaaaaagattaattatttgtttacatcccaaatgttac 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gcttatagatggaacttccttttaaaaagattaattatttgtttacatcccaaatgttac 384

                                                                       
Query: 185 ccccctcccagtcacccccacaatgttacttccctatccccatccccttcgactatgaga 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ccccctcccagtcacccccacaatgttacttccctatccccatccccttcgactatgaga 444

                                                                       
Query: 245 gagcaacactgccttccaccaggtgaccccctactctgttgcatcaagtctttgcaggat 304
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gagcaacactgccctccaccaggtgaccccctactctgttgcatcaagtctttgcaggat 504

                                                                       
Query: 305 taggcacatcctctcctactgaggccaggcatggcagccctctgctacatatgtgttgga 364
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 505 taggcacatcctctcctactgaggccaggcatggcagccctctgctacatatgtgtcgga 564

                                                                       
Query: 365 ggcctctgaccagcctttgtgtactccttggttggtggctcagtcaatgggagctcccag 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ggcctctgaccagcctttgtgtactccttggttggtggctcagtcaatgggagctcccag 624

                                                                       
Query: 425 gggtacagattcgttgattctgttgatctttctgtgtggttgtcatcttcttaagggcct 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gggtacagattcgttgattctgttgatctttctgtgtggttgtcatcttcttaagggcct 684

                                                                       
Query: 485 ttcatccttcccctaactcttccacaggggtcaaggcctgcatccaatatttgtgggtat 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ttcatccttcccctaactcttccacaggggtcaaggcctgcatccaatatttgtgggtat 744

                                           
Query: 545 ctgcatctgtctctgtct--gtcagttgctga 574
           ||||||||||||||||||  ||||||||||||
Sbjct: 745 ctgcatctgtctctgtctcagtcagttgctga 776


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 574
Length of database: 974
Length adjustment: 10
Effective length of query: 564
Effective length of database: 964
Effective search space:   543696
Effective search space used:   543696
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)