Query= MSMg01no484_b23.b1 MSMg01no484_b23.b1 CHROMAT_FILE:
MSMg01no484_b23.b1 PHD_FILE: MSMg01no484_b23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:05:33 2005
(645 letters)
>mm_chr15_6446840_6447884
Length = 1045
Score = 1114 bits (576), Expect = 0.0
Identities = 626/644 (97%), Gaps = 7/644 (1%)
Strand = Plus / Plus
Query: 5 gaattcagtactatcaa--gtgctacccatgtctaaatggaggcactgtaattcttctgg 62
||||||||||||| || |||||||||||||||||||||||| ||| ||||||||||||
Sbjct: 205 gaattcagtacta--aaaggtgctacccatgtctaaatggaggtactataattcttctgg 262
Query: 63 atgggcagtgcctgtgctcctgcccaatgatgtttagaggaatggcctgcgaaatccatc 122
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 263 atgggcagtgcctgtgctcctgcccaatgatgtttaggggaatggcctgcgaaatccatc 322
Query: 123 aaaaaatatagccttcaggtgagatgaactgattttgatattactgaggacaagaatatc 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 aaaaaatatagccttcaggtgagatgaactgattttgatattactgaggacaagaatatc 382
Query: 183 catctcatggttagttaatatgaaaatgagctcttaagctacttttttaaaagatctatt 242
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 383 catctcatggttagttaatatgaaaatgagctcttaagctactttttaaaaagatctatt 442
Query: 243 tattttatgtatatgagtacactgtggttgtacagatggttgtgagccttcatgtagttc 302
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 443 tattttatgtatatgagtacactgtggctgtacagatggttgtgagccttcatgtagttc 502
Query: 303 ttgggaaatgaacttaggacctctgcttgctctggtcaacctggcatgctctggtcaacc 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 ttgggaaatgaacttaggacctctgcttgctctggtcaacctggcatgctctggtcaacc 562
Query: 363 ccgctcactctggtcagcctcgctctttcagtccctgctcactctgatccaaagattcat 422
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 ccactcactctggtcagcctcgctctttcagtccctgctcactctgatccaaagattcat 622
Query: 423 ttattactataaataaatacactgttgctgtcttcagacacacaagaagagggca-tcag 481
|||||||||||||||||||||||||||||||||||||||| |||||||||||| | ||||
Sbjct: 623 ttattactataaataaatacactgttgctgtcttcagacatacaagaagaggg-agtcag 681
Query: 482 atctcattatgggtgtttatgagccaccatgtggttgctgggatttgaagtcagaacctt 541
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 682 atctcattatgggtgtttatgagccaccatgtggttgctgggatttgaagtcaggacctt 741
Query: 542 tgggagagcagtcagtgctctgaccagctgagtcatctcaccagccctttttttaaataa 601
|||||||||| |||||||||||||||||||||||||||||||||||||||| | || |||
Sbjct: 742 tgggagagcaatcagtgctctgaccagctgagtcatctcaccagcccttttgt-aattaa 800
Query: 602 aagatttgtttattattttatataagtacactgtagctgtcttc 645
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 aagatttgtttattattttatataagtacactgtagctgtcttc 844
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 645
Length of database: 1045
Length adjustment: 10
Effective length of query: 635
Effective length of database: 1035
Effective search space: 657225
Effective search space used: 657225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no484_b23.g1 MSMg01no484_b23.g1 CHROMAT_FILE:
MSMg01no484_b23.g1 PHD_FILE: MSMg01no484_b23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:05:34 2005
(639 letters)
>mm_chr15_6472412_6473450
Length = 1039
Score = 1036 bits (536), Expect = 0.0
Identities = 545/548 (99%)
Strand = Plus / Minus
Query: 1 aacttttctttctgtgaggcagatactttcctcccttctgacagctagaatctgaaaagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 748 aacttttctttctgtgaggcagatactttcctcccttctgacagctagaatctgaaaagg 689
Query: 61 gaacttccaaagcctcgatctcaaagggcagagtagacatagcagcttcctcaccacaag 120
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 688 gaacttccaaagcctcgatctcaaagggcagagtagacatagcaacttcctcaccacaag 629
Query: 121 gacggcagtgggcaagtgccaatcccaaaggcagtgagaacatgggcatgagccccctct 180
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 gacggcagtgggcatgtgccaatcccaaaggcagtgagaacatgggcatgagccccctct 569
Query: 181 cccccagtacagaagatcagcgtgtttgcctggagaccagagagggttgtaaaatccaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 cccccagtacagaagatcagcgtgtttgcctggagaccagagagggttgtaaaatccaag 509
Query: 241 acttaccatgtttattggaaagagccgatgcgccttgcactccgtgaccctgcagatgct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 acttaccatgtttattggaaagagccgatgcgccttgcactccgtgaccctgcagatgct 449
Query: 301 gtgactccggcagtgaatgtgcaagttagctgtgaagagcagctacttccttttctgagc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 gtgactccggcagtgaatgtgcaagttagctgtgaagagcagctacttccttttctgagc 389
Query: 361 agtgtggtctaaccagccttcacacattgatatggaagggccctatttgcattttatctc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 agtgtggtctaaccagccttcacacattgatatggaagggccctatttgcattttatctc 329
Query: 421 agcccaggaacattgtatggctggccttgtttctctttgttataattgataacacaagag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 agcccaggaacattgtatggctggccttgtttctctttgttataattgataacacaagag 269
Query: 481 aagggatagacgaagttttgagggctgaaagattaatgcctaaatgaaaaagtatctgaa 540
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 aagggatagacgaagctttgagggctgaaagattaatgcctaaatgaaaaagtatctgaa 209
Query: 541 tactaaat 548
||||||||
Sbjct: 208 tactaaat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 639
Length of database: 1039
Length adjustment: 10
Effective length of query: 629
Effective length of database: 1029
Effective search space: 647241
Effective search space used: 647241
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
