Query= MSMg01no485_n06.b1 MSMg01no485_n06.b1 CHROMAT_FILE:
MSMg01no485_n06.b1 PHD_FILE: MSMg01no485_n06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:07:56 2005
(601 letters)
>mm_chr15_10377138_10378138
Length = 1001
Score = 1081 bits (559), Expect = 0.0
Identities = 589/601 (98%), Gaps = 4/601 (0%)
Strand = Plus / Plus
Query: 5 gaattccatagagatcctagttcattcttggaaagctcatgggtacagactaacaccatt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccatagagatcctagttcattcttggaaagctcatgggtacagactaacaccatt 264
Query: 65 aagacatgaacaaggtcactgtggagcaaggtcattagggttgacctaccactggttgtg 124
|||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||
Sbjct: 265 aagacatgaacaaggtcactgtggagcaaggtcattagggctgacctaccactggctgtg 324
Query: 125 gttcagcaggtactttgacagattttttcacatctttggttttctttcctttggatttag 184
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cttcagcaggtgctttgacagattttttcacatctttggttttctttcctttggatttag 384
Query: 185 gaacactggaaaataaattattttatataatacaaaagtaaaaatcctttccagttgtca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gaacactggaaaataaattattttatataatacaaaagtaaaaatcctttccagttgtca 444
Query: 245 tctattcccaaaaatattcaaaatattaaatatgaatcaagctgatttattcattttaat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tctattcccaaaaatattcaaaatattaaatatgaatcaagctgatttattcattttaat 504
Query: 305 aactgatttaatt----ttcacatgtcaacaaagatctttaaaaaacaacctgagaggta 360
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aactgatttaattaattttcacatgtcaacaaagatctttaaaaaacaacctgagaggta 564
Query: 361 aaaaataaatttggcataaaactaaagaatctacttaaagcaaaagctaaaccaatgtcc 420
|| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 565 aagaataaatttggcataaaaccaaagaatctacttaaagcaaaagctaaaccaatgtcc 624
Query: 421 ccaaaacatccttacgtatttatatatggtctttttattgaaaaggagagcccttcacac 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tcaaaacatccttacgtatttatatatggtctttttattgaaaaggagagcccttcacac 684
Query: 481 ttcctttgcaaccagtgctgctcacactagtacatgatattgagtgtcctgtaacattaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ttcctttgcaaccagtgctgctcacactagtacatgatattgagtgtcctgtaacattaa 744
Query: 541 cttcgttggtttttttcctccagtttattggctttttagtagttattttagttttttgtt 600
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 gttcgttggtttttttcctccagtttattggctttttagtagttattttagttttttgtt 804
Query: 601 t 601
|
Sbjct: 805 t 805
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 601
Length of database: 1001
Length adjustment: 10
Effective length of query: 591
Effective length of database: 991
Effective search space: 585681
Effective search space used: 585681
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no485_n06.g1 MSMg01no485_n06.g1 CHROMAT_FILE:
MSMg01no485_n06.g1 PHD_FILE: MSMg01no485_n06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:07:56 2005
(585 letters)
>mm_chr15_10535512_10536496
Length = 985
Score = 795 bits (411), Expect = 0.0
Identities = 441/451 (97%)
Strand = Plus / Minus
Query: 1 tgaggattttctatggacgctccacagtgaatcttataagaagaacacagtccgcaggtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 451 tgaggattttctatggacgctccacagtgaatcttataagaagaacacagtccacaggtg 392
Query: 61 actgcatacttcagatgggaagcttaagtgagatactcagcactgtgacggctcagcgtg 120
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 391 actgcatacttcagatgggaagcttaagcgagatactcagcactgtgacggctcagcgtg 332
Query: 121 tcaggatgtgttcattgaaaaaaaatcacataaagtatgtggctactattttattatgac 180
||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||
Sbjct: 331 tcaggatgtgttcattgaaaaaaaaccatataaagtatgtggctactattttattatgac 272
Query: 181 taacaggacttcaccctgatcactcattttcctatactctttaggctattaaaaggctgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 taacaggacttcaccctgatcactcattttcctatactctttaggctattaaaaggctgc 212
Query: 241 aaatctttacgacaaaacagcaacaacagcaaaacaaaacccacaacacaacaaaacaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 aaatctttacgacaaaacagcaacaacagcaaaacaaaacccacaacacaacaaaacaaa 152
Query: 301 aatgttttgagtctggtgtggtagcacttttggctgaggcagaaggatggcaagtgtagg 360
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 151 aatgttttgagtctggtgtggtagcacttttggctgaggtagaaggatggcaagtgttcg 92
Query: 361 gtcagcctgggctcctggggacatcctgactccaatagcaaggataaggaactacaaagg 420
| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 91 gccagcctgggctcctggggacatcctgactccaatagcaaggataaagaactacaaagg 32
Query: 421 tttaacagtgtccacaccacgtggttttgct 451
|||||||||||||||||||||||||| ||||
Sbjct: 31 tttaacagtgtccacaccacgtggttgtgct 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 585
Length of database: 985
Length adjustment: 10
Effective length of query: 575
Effective length of database: 975
Effective search space: 560625
Effective search space used: 560625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
