Query= MSMg01no486_e13.b1 MSMg01no486_e13.b1 CHROMAT_FILE:
MSMg01no486_e13.b1 PHD_FILE: MSMg01no486_e13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:08:33 2005
(649 letters)
>mm_chr15_39023368_39024417
Length = 1050
Score = 1218 bits (630), Expect = 0.0
Identities = 645/650 (99%), Gaps = 1/650 (0%)
Strand = Plus / Minus
Query: 1 attcctggagtatccagagcacagaattacatagcaaatgatagtattaaaatgggtgat 60
||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 850 attcctggagtatagagagcacagaattacatagcaaatggtagtattaaaatgggtgat 791
Query: 61 ggtaagattatgttctagcttgtgtgtcttggtgaagaatctacacttgtcttataatca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 790 ggtaagattatgttctagcttgtgtgtcttggtgaagaatctacacttgtcttataatca 731
Query: 121 ttatactgtgggagtttttaggtagaaaactgacttgataggcttcgactttcagaagca 180
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 730 ttatactgtgggagtttttaggtagaaaactgacttgataggcttcaactttcagaagca 671
Query: 181 tatcctgcattcatttctttattcatatctaaaacacctgccaatagaattactcaaagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 tatcctgcattcatttctttattcatatctaaaacacctgccaatagaattactcaaagt 611
Query: 241 tcacagatgcaccctgatttacaagtggagacacaaataga-tttttttttttacttctt 299
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 610 tcacagatgcaccctgatttacaagtggagacacaaatagattttttttttttacttctt 551
Query: 300 ggtttcagaatttatttctgtagctatttttctcagtagattataacagcatgataatga 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 ggtttcagaatttatttctgtagctatttttctcagtagattataacagcatgataatga 491
Query: 360 ggccaaggtcatggtttaaatcctgggtgagtcagagagtgcagtagccacagctgactg 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 ggccaaggtcatggtttaaatcctgggtgagtcagagagtgcagtagccacagctgactg 431
Query: 420 gtaatctttgccagttgtcaaatgacaacaaatactattttttgactagaaattgagtgg 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 gtaatctttgccagttgtcaaatgacaacaaatactattttttgactagaaattgagtgg 371
Query: 480 gagaatatgaccagttcatccaatgctaatcaacattattagaaaagcagctcagagagc 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 gagaatatgaccagttcatccaatgctaatcaacattattagaaaagcagctcagagagc 311
Query: 540 ctggctattgcttataagactaaagtatctttctaaattaaaacaatagtacattattag 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 ctggctattgcttataagactaaagtatctttctaaattaaaacaatagtacattattag 251
Query: 600 tagtgaccaaagactcagcaacagaaaaaaatacattgtttgctcctaga 649
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 tagtgaccaaagactcagcaacagaaaaaaatacattgtttgctcctaga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 649
Length of database: 1050
Length adjustment: 10
Effective length of query: 639
Effective length of database: 1040
Effective search space: 664560
Effective search space used: 664560
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no486_e13.g1 MSMg01no486_e13.g1 CHROMAT_FILE:
MSMg01no486_e13.g1 PHD_FILE: MSMg01no486_e13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:08:33 2005
(579 letters)
>mm_chr15_38849892_38850863
Length = 972
Score = 957 bits (495), Expect = 0.0
Identities = 556/581 (95%), Gaps = 11/581 (1%)
Strand = Plus / Plus
Query: 1 aatagaaaaatgaaaggtgtgtgaatgcatcctgaagacgggcctgcggagggagcagac 60
|||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||
Sbjct: 201 aatagaaaaatgaaaggtgtgtgagtgcatcctgaagccgggcctgcggagggagcagac 260
Query: 61 tcatttcactgagcaggagaaacaaaaagactagagagaggagtgtatttcctcggctca 120
|||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||
Sbjct: 261 tcatttcactgagcaggagaaacaaaaagactagagcgaggagtgtatttcctctgctca 320
Query: 121 gaggtttacatggtgtgttctatgcaaatactcagttgtagcgtggacttcagagtatca 180
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 321 gaggtttacatggtgtgttctatgaaaatactcagttgtagcgtggacttcagagtatca 380
Query: 181 aactgaagaaataccacaggtcaggtttgtagtctttacctctaaaggtttggtttccag 240
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 381 aactgaagaaataccacaggtcaggtttgtagtctttgcctctaaaggtttggtttccag 440
Query: 241 atgtggtatttgaacattctgtgggaagatgttgattcctaacaagattgtactcaaaag 300
|||||| ||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 441 atgtggaatttgaacattctgtgggaagat------tcctaacaagattgtactcaaaag 494
Query: 301 gttgggacaacattggcatcctgttggtgctgtcgtgtgactgct--gtgttggctcaac 358
||||||||||||||| |||||||||||||||||| |||||||||| || || |||||
Sbjct: 495 gttgggacaacattgacatcctgttggtgctgtcatgtgactgctacgttttt--tcaac 552
Query: 359 agtggctgccccatggcctgaagtagttcttgtttctgaagtatttgttccctggttgtc 418
|||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||
Sbjct: 553 agtggctgccccatggcctgaagtcgttcttgtttctgaagtatttgttcccaggttgtc 612
Query: 419 tgtgcttctgcacactgttagaatagtaaacacagctgaggctttgatgtgtgacctgtg 478
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 613 tgtgcttctgcacactgttagaatagtaaacacagctgaggctttgatgtatgacctgtg 672
Query: 479 aatttctgttgtttacaacttgaagagcaatttcatgtagattcccaatcctcttctgag 538
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 673 aatttctgttgtttacaacttgaagagcaatttcatgtag-ttcccaatcctcttctgag 731
Query: 539 atgtccctcctccatccttgttggatgcggcttttttgctt 579
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 atgtccctcctccatccttgttggatgcggcttttttgctt 772
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 579
Length of database: 972
Length adjustment: 10
Effective length of query: 569
Effective length of database: 962
Effective search space: 547378
Effective search space used: 547378
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
