Query= MSMg01no487_e21.b1 MSMg01no487_e21.b1 CHROMAT_FILE:
MSMg01no487_e21.b1 PHD_FILE: MSMg01no487_e21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:09:53 2005
(565 letters)
>mm_chr15_17716152_17717116
Length = 965
Score = 969 bits (501), Expect = 0.0
Identities = 544/563 (96%), Gaps = 11/563 (1%)
Strand = Plus / Minus
Query: 5 gaattctgttaatg-tcttc-cacaagtttggatgtgtgtgtgtgtgtgtgtgtgtgtgt 62
|||| ||||||||| | ||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 908 gaatcctgttaatgat-ttcacacaagtttggatgtgtgtgtgtgtgtgtgtgtgtgtgt 850
Query: 63 gtgtgtgagagagagagagagagagagagagagagagagagagagagagagagagagaga 122
|||||| | | | | | | | ||||||||||||||||||||||||||||||||
Sbjct: 849 gtgtgt--------gtgtgtgtgtgtgtgagagagagagagagagagagagagagagaga 798
Query: 123 gagagtcagaaaaagagagagacagagacagactgtggacacacagaattgtgctctttt 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 797 gagagtcagaaaaagagagagacagagacagactgtggacacacagaattgtgctctttt 738
Query: 183 atttttgtagaaaaaagtaatttttgatttataaaaatatatgtgataggtcaataaatg 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 atttttgtagaaaaaagtaatttttgatttataaaaatatatgtgataggtcaataaatg 678
Query: 243 tttcttaatgtctttttattttctttatttccatcacttttctcttgttagatcatgatg 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 tttcttaatgtctttttattttctttatttccatcacttttctcttgttagatcatgatg 618
Query: 303 aatggccacaccattttctgatatcgagtggataggggaagatattttggaattagaact 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 aatggccacaccattttctgatatcgagtggataggggaagatattttggaattagaact 558
Query: 363 ttacaacaaaagatatactaataaatattcaatattcagaaaaagcaacttgctttgtat 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 ttacaacaaaagatatactaataaatattcaatattcagaaaaagcaacttgctttgtat 498
Query: 423 tgtaaagcattgcatgtgaaaatcattataaatgtaaacctggaaattaaaatatccatg 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 tgtaaagcattgcatgtgaaaatcattataaatgtaaacctggaaattaaaatatccatg 438
Query: 483 aatccatcagacacaaacatttgtagcataaagttttaatatgcatcagtttagtggtta 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 aatccatcagacacaaacatttgtagcataaagttttaatatgcatcagtttagtggtta 378
Query: 543 atgcttatcgaatcttatatttc 565
|||||||||||||||||||||||
Sbjct: 377 atgcttatcgaatcttatatttc 355
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 105
Number of extensions: 27
Number of successful extensions: 27
Number of sequences better than 10.0: 1
Number of HSP's gapped: 13
Number of HSP's successfully gapped: 1
Length of query: 565
Length of database: 965
Length adjustment: 10
Effective length of query: 555
Effective length of database: 955
Effective search space: 530025
Effective search space used: 530025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no487_e21.g1 MSMg01no487_e21.g1 CHROMAT_FILE:
MSMg01no487_e21.g1 PHD_FILE: MSMg01no487_e21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:09:53 2005
(660 letters)
>mm_chr15_17550509_17551568
Length = 1060
Score = 1207 bits (624), Expect = 0.0
Identities = 651/660 (98%)
Strand = Plus / Plus
Query: 1 tttgtatagcactataccacatttttaatagggtcatttggttctctggagtctaactgc 60
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 201 tttgtatagcactataccacatttttaatagggtcattttgttctctggagtctaactgc 260
Query: 61 ttgagttcttatatattggacattagccttctttggaagaaagatatgaagcatccagta 120
||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||
Sbjct: 261 ttgagttcttatatattggacgttaaccttctttggaagaaagatatgaagcatccagta 320
Query: 121 tgaggagtcacatactttgatactctcagctcattactagaactatactttagaaaatct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgaggagtcacatactttgatactctcagctcattactagaactatactttagaaaatct 380
Query: 181 ggacatagattatgctaaagaatctataccttatacctgttatgacagatgttagtattt 240
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 381 ggacatagattatgctaaagaatctataacttatacctgttatgacagatgttagtattt 440
Query: 241 catgtcttagtgaaacttttaattatgaaacatagtatgcatacgccatgaacatactct 300
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 catgtcttagtgatacttttaattatgaaacatagtatgcatacgccatgaacatactct 500
Query: 301 aattgtgactctttttcatcacatataaattataataacatttacctcaaaactatttct 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aattgtgactctttttcatcacatataaattataataacatttacctcaaaactatttcc 560
Query: 361 ctggcattcttaagtgatgcctaatcctcttaataccttatgatcaaaaccaatctattt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctggcattcttaagtgatgcctaatcctcttaataccttatgatcaaaaccaatctattt 620
Query: 421 tgaattattgacaagtttaaataaaactgggtaaaggatatgaagtacttatacctttaa 480
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tgaattattgaaaagtttaaataaaactgggtaaaggatatgaagtacttatacctttaa 680
Query: 481 cattgtagttgctcaatattatcacagggaattcataaattcttaccagagtacagggag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 cattgtagttgctcaatattatcacagggaattcataaattcttaccagagtacagggag 740
Query: 541 atgcatcaggtaatctatcagaaaatggaatcaggcatcattataacattacaatgatat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 atgcatcaggtaatctatcagaaaatggaatcaggcatcattataacattacaatgatat 800
Query: 601 gactctaataccatgccattacaacatatttttgacttcaattctcttgttattttcatc 660
|||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct: 801 gactctaataccatgccattacaacatatttttgactttaattcccttgttattttcatc 860
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 660
Length of database: 1060
Length adjustment: 10
Effective length of query: 650
Effective length of database: 1050
Effective search space: 682500
Effective search space used: 682500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
